A5PJM0_BOVIN (Bos taurus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSBTAG00000004564 T02247_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000005997 CCCH ZF 4 19
ENSBTAP00000005997 CCCH ZF 126 152
ENSBTAP00000005997 CCCH ZF 163 186
ENSBTAP00000005998 CCCH ZF 1 14
ENSBTAP00000005998 CCCH ZF 121 147
ENSBTAP00000005998 CCCH ZF 158 181
ENSBTAP00000051203 CCCH ZF 38 60
ENSBTAP00000051203 CCCH ZF 167 193
ENSBTAP00000051203 CCCH ZF 204 227

Links

Other CCCH ZF family RBPs
Other Bos taurus RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R004201 Ailuropoda melanoleuca Ame_R004201 N 1.000
MBNL1 Sus scrofa ENSSSCG00000011720 N 1.000
MBNL1 Meleagris gallopavo ENSMGAG00000010862 N 1.000
MBNL1 Procavia capensis ENSPCAG00000002143 N 1.000
Q8CIQ0_RAT Rattus norvegicus ENSRNOG00000014076 N 1.000
LOC100392264 Callithrix jacchus ENSCJAG00000001054 I 1.000
MBNL1 Felis catus ENSFCAG00000002293 N 1.000
MBNL1 Homo sapiens ENSG00000152601 D 0.985
MBNL1 Gorilla gorilla ENSGGOG00000009430 I 0.985
MBNL1 Tetraodon nigroviridis ENSTNIG00000007695 N 0.955
MBNL2 Felis catus ENSFCAG00000005148 N 0.908
MBNL3 Ornithorhynchus anatinus ENSOANG00000011697 I 0.908
MBNL3 Homo sapiens ENSG00000076770 I 0.896
MBNL3 Macaca mulatta ENSMMUG00000003071 I 0.896
LOC100397507 Callithrix jacchus ENSCJAG00000004080 I 0.896
MBNL2 Oryctolagus cuniculus ENSOCUG00000000220 I 0.896
MBNL2 Canis familiaris ENSCAFG00000005523 I 0.896
MBNL3 Monodelphis domestica ENSMODG00000015304 I 0.894
MBNL3 Sus scrofa ENSSSCG00000012676 N 0.892
MBNL3 Cavia porcellus ENSCPOG00000008092 N 0.892
MBNL3 Tupaia belangeri ENSTBEG00000008063 N 0.877
MBNL3 Procavia capensis ENSPCAG00000014188 N 0.862
mbnl3 Xenopus tropicalis ENSXETG00000005409 I 0.833
MBNL3 Tarsius syrichta ENSTSYG00000014189 N 0.821
MBNL2 Macaca mulatta ENSMMUG00000022744 N 0.740
MBNL2 Dasypus novemcinctus ENSDNOG00000018141 N 0.740
MBNL2 Otolemur garnettii ENSOGAG00000017001 N 0.738
MBNL3 Echinops telfairi ENSETEG00000015907 N 0.727
MBNL1 Otolemur garnettii ENSOGAG00000009336 N 0.727
MBNL1 Echinops telfairi ENSETEG00000016568 N 0.727
XR_020327.1 Pan troglodytes ENSPTRG00000022280 N 0.701