CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUPL2
(
Otolemur garnettii
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSOGAG00000017153
T03098_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000015366
CCCH ZF
1
18
MTICQFFLQGRCRFGDRC
Links
Other
CCCH ZF
family RBPs
Other
Otolemur garnettii
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NUPL2
Erinaceus europaeus
ENSEEUG00000006736
N
1.000
NUPL2
Canis familiaris
ENSCAFG00000002749
N
1.000
Ame_R009554
Ailuropoda melanoleuca
Ame_R009554
N
1.000
NUPL2
Felis catus
ENSFCAG00000005813
N
1.000
NUPL2
Loxodonta africana
ENSLAFG00000007523
N
1.000
Nupl2
Mus musculus
ENSMUSG00000048439
N
1.000
NUPL2
Microcebus murinus
ENSMICG00000013654
N
1.000
NUPL2
Vicugna pacos
ENSVPAG00000000609
N
1.000
Q2YDG6_BOVIN
Bos taurus
ENSBTAG00000016014
N
1.000
NUPL2
Spermophilus tridecemlineatus
ENSSTOG00000008486
N
1.000
Nupl2
Rattus norvegicus
ENSRNOG00000010435
N
1.000
NUPL2
Pteropus vampyrus
ENSPVAG00000008475
N
0.944
NUPL2
Echinops telfairi
ENSETEG00000011238
N
0.944
NUPL2
Homo sapiens
ENSG00000136243
N
0.944
NUPL2
Pan troglodytes
ENSPTRG00000018983
N
0.944
NUPL2
Gorilla gorilla
ENSGGOG00000001038
N
0.944
NUPL2
Macaca mulatta
ENSMMUG00000001560
N
0.944
NUPL2
Cavia porcellus
ENSCPOG00000015063
N
0.944
LOC100391607
Callithrix jacchus
ENSCJAG00000001466
N
0.944
NUPL2
Tupaia belangeri
ENSTBEG00000001635
N
0.944
NUPL2
Tursiops truncatus
ENSTTRG00000012802
N
0.944
NUPL2
Tarsius syrichta
ENSTSYG00000003372
N
0.944
NUPL2
Oryctolagus cuniculus
ENSOCUG00000014808
N
0.944
NUPL2
Procavia capensis
ENSPCAG00000010062
N
0.944
NUPL2
Sorex araneus
ENSSARG00000000658
N
0.944
ENSPPYG00000017733
Pongo pygmaeus
ENSPPYG00000017733
N
0.944
NUPL2
Monodelphis domestica
ENSMODG00000025473
N
0.889
NUPL2
Ochotona princeps
ENSOPRG00000013966
N
0.889
NUPL2
Danio rerio
ENSDARG00000029043
N
0.722
nupl2
Xenopus tropicalis
ENSXETG00000005935
N
0.722
Q5XGN1
Xenopus laevis
Q5XGN1
N
0.722
NUPL2
Tetraodon nigroviridis
ENSTNIG00000001691
N
0.722
NUPL2
Gasterosteus aculeatus
ENSGACG00000007219
N
0.722