CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
NUPL2
(
Tetraodon nigroviridis
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSTNIG00000001691
T03477_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000000349
CCCH ZF
1
18
MTVCSFFLQGRCRYGEKC
Links
Other
CCCH ZF
family RBPs
Other
Tetraodon nigroviridis
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NUPL2
Oryzias latipes
ENSORLG00000005203
N
0.889
nupl2
Xenopus tropicalis
ENSXETG00000005935
N
0.889
NUPL2
Ochotona princeps
ENSOPRG00000013966
N
0.833
Q5XGN1
Xenopus laevis
Q5XGN1
N
0.833
NUPL2
Gasterosteus aculeatus
ENSGACG00000007219
N
0.833
NUPL2
Monodelphis domestica
ENSMODG00000025473
N
0.778
NUPL2
Danio rerio
ENSDARG00000029043
N
0.778
NUPL2
Tarsius syrichta
ENSTSYG00000003372
N
0.778
NUPL2
Procavia capensis
ENSPCAG00000010062
N
0.778
NUPL2
Sorex araneus
ENSSARG00000000658
N
0.778
NUPL2
Oryctolagus cuniculus
ENSOCUG00000014808
N
0.778
NUPL2
Pteropus vampyrus
ENSPVAG00000008475
N
0.778
NUPL2
Spermophilus tridecemlineatus
ENSSTOG00000008486
N
0.722
Nupl2
Rattus norvegicus
ENSRNOG00000010435
N
0.722
NUPL2
Otolemur garnettii
ENSOGAG00000017153
N
0.722
NUPL2
Loxodonta africana
ENSLAFG00000007523
N
0.722
Ame_R009554
Ailuropoda melanoleuca
Ame_R009554
N
0.722
NUPL2
Vicugna pacos
ENSVPAG00000000609
N
0.722
NUPL2
Tursiops truncatus
ENSTTRG00000012802
N
0.722
Q2YDG6_BOVIN
Bos taurus
ENSBTAG00000016014
N
0.722
NUPL2
Canis familiaris
ENSCAFG00000002749
N
0.722
NUPL2
Microcebus murinus
ENSMICG00000013654
N
0.722
NUPL2
Felis catus
ENSFCAG00000005813
N
0.722
NUPL2
Erinaceus europaeus
ENSEEUG00000006736
N
0.722
Nupl2
Mus musculus
ENSMUSG00000048439
N
0.722