CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUPL2
(
Tarsius syrichta
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSTSYG00000003372
T03554_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000003089
CCCH ZF
1
18
MTVCQFFLQGRCRFGDRC
Links
Other
CCCH ZF
family RBPs
Other
Tarsius syrichta
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NUPL2
Oryctolagus cuniculus
ENSOCUG00000014808
N
1.000
NUPL2
Sorex araneus
ENSSARG00000000658
N
1.000
NUPL2
Procavia capensis
ENSPCAG00000010062
N
1.000
Nupl2
Mus musculus
ENSMUSG00000048439
N
0.944
NUPL2
Loxodonta africana
ENSLAFG00000007523
N
0.944
NUPL2
Spermophilus tridecemlineatus
ENSSTOG00000008486
N
0.944
NUPL2
Otolemur garnettii
ENSOGAG00000017153
N
0.944
NUPL2
Felis catus
ENSFCAG00000005813
N
0.944
NUPL2
Ochotona princeps
ENSOPRG00000013966
N
0.944
Nupl2
Rattus norvegicus
ENSRNOG00000010435
N
0.944
NUPL2
Microcebus murinus
ENSMICG00000013654
N
0.944
Q2YDG6_BOVIN
Bos taurus
ENSBTAG00000016014
N
0.944
NUPL2
Canis familiaris
ENSCAFG00000002749
N
0.944
Ame_R009554
Ailuropoda melanoleuca
Ame_R009554
N
0.944
NUPL2
Erinaceus europaeus
ENSEEUG00000006736
N
0.944
NUPL2
Vicugna pacos
ENSVPAG00000000609
N
0.944
NUPL2
Tupaia belangeri
ENSTBEG00000001635
N
0.889
ENSPPYG00000017733
Pongo pygmaeus
ENSPPYG00000017733
N
0.889
NUPL2
Pan troglodytes
ENSPTRG00000018983
N
0.889
NUPL2
Pteropus vampyrus
ENSPVAG00000008475
N
0.889
NUPL2
Echinops telfairi
ENSETEG00000011238
N
0.889
LOC100391607
Callithrix jacchus
ENSCJAG00000001466
N
0.889
NUPL2
Cavia porcellus
ENSCPOG00000015063
N
0.889
NUPL2
Gorilla gorilla
ENSGGOG00000001038
N
0.889
NUPL2
Homo sapiens
ENSG00000136243
N
0.889
NUPL2
Macaca mulatta
ENSMMUG00000001560
N
0.889
NUPL2
Tursiops truncatus
ENSTTRG00000012802
N
0.889
NUPL2
Monodelphis domestica
ENSMODG00000025473
N
0.833
NUPL2
Tetraodon nigroviridis
ENSTNIG00000001691
N
0.778
NUPL2
Gasterosteus aculeatus
ENSGACG00000007219
N
0.778
NUPL2
Danio rerio
ENSDARG00000029043
N
0.778
fgenesh1_pg.00009_#_218
Aspergillus carbonarius
fgenesh1_pg.00009_#_218
N
0.737
NUPL2
Oryzias latipes
ENSORLG00000005203
N
0.722