Zc3h8 (Rattus norvegicus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSRNOG00000017647 T03324_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000023845 CCCH ZF 206 231
ENSRNOP00000023845 CCCH ZF 235 260
ENSRNOP00000023845 CCCH ZF 262 284
ENSRNOP00000060301 CCCH ZF 206 231
ENSRNOP00000060301 CCCH ZF 235 260
ENSRNOP00000060301 CCCH ZF 262 284

Links

Other CCCH ZF family RBPs
Other Rattus norvegicus RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Zc3h8 Mus musculus ENSMUSG00000027387 N 0.987
ENSCPOG00000008258 Cavia porcellus ENSCPOG00000008258 N 0.920
A6MKC0_CALJA Callithrix jacchus ENSCJAG00000016492 N 0.920
ZC3H8 Homo sapiens ENSG00000144161 N 0.920
ZC3H8 Gorilla gorilla ENSGGOG00000009004 N 0.920
ZC3H8 Pan troglodytes ENSPTRG00000012362 N 0.920
ENSPPYG00000012165 Pongo pygmaeus ENSPPYG00000012165 N 0.920
ZC3H8 Choloepus hoffmanni ENSCHOG00000010391 N 0.920
ZC3H8 Dasypus novemcinctus ENSDNOG00000018056 N 0.920
ZC3H8 Oryctolagus cuniculus ENSOCUG00000011253 N 0.907
ZC3H8 Loxodonta africana ENSLAFG00000004675 N 0.907
Q17QY2_BOVIN Bos taurus ENSBTAG00000015965 N 0.907
ZC3H8 Canis familiaris ENSCAFG00000007155 N 0.907
ZC3H8 Vicugna pacos ENSVPAG00000005911 N 0.893
ZC3H8 Sus scrofa ENSSSCG00000008099 N 0.893
ZC3H8 Echinops telfairi ENSETEG00000016560 N 0.880
ENSCPOG00000023849 Cavia porcellus ENSCPOG00000023849 N 0.880
ZC3H8 Procavia capensis ENSPCAG00000015426 N 0.880
Ame_R012777 Ailuropoda melanoleuca Ame_R012777 N 0.880
ZC3H8 Ochotona princeps ENSOPRG00000011183 N 0.867
ZC3H8 Microcebus murinus ENSMICG00000013555 N 0.840
ZC3H8 Sorex araneus ENSSARG00000012883 N 0.827
ZC3H6 Meleagris gallopavo ENSMGAG00000003025 N 0.821
ZC3H6 Gallus gallus ENSGALG00000008269 N 0.821
ZC3H6 Ornithorhynchus anatinus ENSOANG00000012054 N 0.821
ZC3H8 Erinaceus europaeus ENSEEUG00000006984 N 0.813
ZC3H8 Taeniopygia guttata ENSTGUG00000007468 N 0.800
zc3h6 Xenopus tropicalis ENSXETG00000013762 N 0.795
ZC3H6 Loxodonta africana ENSLAFG00000001151 N 0.782
ZC3H6 Oryctolagus cuniculus ENSOCUG00000011125 N 0.769
ZC3H6 Pteropus vampyrus ENSPVAG00000013728 N 0.769
ZC3H6 Pan troglodytes ENSPTRG00000012363 N 0.769
ZC3H6 Ochotona princeps ENSOPRG00000012717 N 0.769
ZC3H6 Sus scrofa ENSSSCG00000008096 N 0.769
ZC3H6 Homo sapiens ENSG00000188177 N 0.769
ZC3H6 Gorilla gorilla ENSGGOG00000001665 N 0.769
ZC3H6 Callithrix jacchus ENSCJAG00000016479 N 0.769
ZC3H6 Tarsius syrichta ENSTSYG00000006672 N 0.769
ZC3H6 Bos taurus ENSBTAG00000020646 N 0.769
ZC3H6 Canis familiaris ENSCAFG00000007160 N 0.769
ZC3H6 Tursiops truncatus ENSTTRG00000013154 N 0.769
ZC3H6 Vicugna pacos ENSVPAG00000005912 N 0.769
ZC3H6 Anolis carolinensis ENSACAG00000005815 N 0.763
ZC3H6 Sorex araneus ENSSARG00000001035 N 0.763
Zc3h6 Dipodomys ordii ENSDORG00000013967 N 0.756
Ame_R012775 Ailuropoda melanoleuca Ame_R012775 N 0.756
ZC3H6 Dasypus novemcinctus ENSDNOG00000000253 N 0.753
Zc3h6 Mus musculus ENSMUSG00000042851 N 0.753
Zc3h6 Rattus norvegicus ENSRNOG00000026277 N 0.737
ZC3H6 Tupaia belangeri ENSTBEG00000016232 N 0.737
ZC3H6 Otolemur garnettii ENSOGAG00000002556 N 0.737
ZC3H6 Spermophilus tridecemlineatus ENSSTOG00000008120 N 0.737
ZC3H6 Macaca mulatta ENSMMUG00000016430 N 0.737
ZC3H6 Myotis lucifugus ENSMLUG00000004896 N 0.724
ZC3H6 Monodelphis domestica ENSMODG00000006612 N 0.720
ZC3H6 Procavia capensis ENSPCAG00000015468 N 0.718
CABZ01077452.1 Danio rerio ENSDARG00000075165 N 0.714