CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZC3H6
(
Tupaia belangeri
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSTBEG00000016232
T03446_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000014115
CCCH ZF
202
227
KGKQICKYFLEGRCIKGDQCKFDHDA
ENSTBEP00000014115
CCCH ZF
231
256
KRKEICKFYLQGYCTKGENCIYMHNI
ENSTBEP00000014115
CCCH ZF
259
280
KYFYHSGAKCYQGDNCKFSHDD
Links
Other
CCCH ZF
family RBPs
Other
Tupaia belangeri
RBPs
59 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZC3H6
Macaca mulatta
ENSMMUG00000016430
N
0.986
ZC3H6
Otolemur garnettii
ENSOGAG00000002556
N
0.986
ZC3H6
Callithrix jacchus
ENSCJAG00000016479
N
0.973
ZC3H6
Spermophilus tridecemlineatus
ENSSTOG00000008120
N
0.973
ZC3H6
Myotis lucifugus
ENSMLUG00000004896
N
0.959
ZC3H6
Sorex araneus
ENSSARG00000001035
N
0.932
ZC3H6
Canis familiaris
ENSCAFG00000007160
N
0.910
ZC3H6
Homo sapiens
ENSG00000188177
N
0.910
ZC3H6
Pan troglodytes
ENSPTRG00000012363
N
0.910
ZC3H6
Sus scrofa
ENSSSCG00000008096
N
0.910
ZC3H6
Bos taurus
ENSBTAG00000020646
N
0.910
ZC3H6
Gorilla gorilla
ENSGGOG00000001665
N
0.910
Ame_R012775
Ailuropoda melanoleuca
Ame_R012775
N
0.910
ZC3H6
Vicugna pacos
ENSVPAG00000005912
N
0.910
ZC3H6
Tursiops truncatus
ENSTTRG00000013154
N
0.910
ZC3H6
Tarsius syrichta
ENSTSYG00000006672
N
0.910
ZC3H6
Ochotona princeps
ENSOPRG00000012717
N
0.897
Zc3h6
Dipodomys ordii
ENSDORG00000013967
N
0.897
ZC3H6
Pteropus vampyrus
ENSPVAG00000013728
N
0.897
ZC3H6
Oryctolagus cuniculus
ENSOCUG00000011125
N
0.885
ZC3H6
Loxodonta africana
ENSLAFG00000001151
N
0.885
ZC3H6
Anolis carolinensis
ENSACAG00000005815
N
0.878
Zc3h6
Rattus norvegicus
ENSRNOG00000026277
N
0.867
ZC3H6
Dasypus novemcinctus
ENSDNOG00000000253
N
0.859
ZC3H6
Procavia capensis
ENSPCAG00000015468
N
0.846
ZC3H8
Taeniopygia guttata
ENSTGUG00000007468
N
0.838
ZC3H6
Ornithorhynchus anatinus
ENSOANG00000012054
N
0.833
Zc3h6
Mus musculus
ENSMUSG00000042851
N
0.821
ZC3H6
Meleagris gallopavo
ENSMGAG00000003025
N
0.808
zc3h6
Xenopus tropicalis
ENSXETG00000013762
N
0.808
ZC3H6
Gallus gallus
ENSGALG00000008269
N
0.808
ZC3H6
Monodelphis domestica
ENSMODG00000006612
N
0.797
A6MKC0_CALJA
Callithrix jacchus
ENSCJAG00000016492
N
0.784
ENSPPYG00000012165
Pongo pygmaeus
ENSPPYG00000012165
N
0.784
ZC3H8
Erinaceus europaeus
ENSEEUG00000006984
N
0.773
Ame_R012777
Ailuropoda melanoleuca
Ame_R012777
N
0.770
ZC3H8
Sorex araneus
ENSSARG00000012883
N
0.770
ZC3H8
Microcebus murinus
ENSMICG00000013555
N
0.757
ZC3H8
Echinops telfairi
ENSETEG00000016560
N
0.757
ZC3H8
Choloepus hoffmanni
ENSCHOG00000010391
N
0.750
ZC3H8
Pan troglodytes
ENSPTRG00000012362
N
0.750
ZC3H8
Canis familiaris
ENSCAFG00000007155
N
0.750
ZC3H8
Gorilla gorilla
ENSGGOG00000009004
N
0.750
ZC3H8
Vicugna pacos
ENSVPAG00000005911
N
0.750
ZC3H8
Sus scrofa
ENSSSCG00000008099
N
0.750
ZC3H8
Homo sapiens
ENSG00000144161
N
0.750
Q17QY2_BOVIN
Bos taurus
ENSBTAG00000015965
N
0.750
ZC3H8
Loxodonta africana
ENSLAFG00000004675
N
0.750
ZC3H8
Dasypus novemcinctus
ENSDNOG00000018056
N
0.750
ENSTNIG00000016608
Tetraodon nigroviridis
ENSTNIG00000016608
N
0.740
ENSTRUG00000012901
Takifugu rubripes
ENSTRUG00000012901
N
0.740
Zc3h8
Rattus norvegicus
ENSRNOG00000017647
N
0.737
ZC3H8
Oryctolagus cuniculus
ENSOCUG00000011253
N
0.737
CABZ01077452.1
Danio rerio
ENSDARG00000075165
N
0.731
ZC3H4
Oryzias latipes
ENSORLG00000011179
N
0.727
Zc3h8
Mus musculus
ENSMUSG00000027387
N
0.724
ZC3H6
Cavia porcellus
ENSCPOG00000003445
N
0.718
ZC3H8
Ochotona princeps
ENSOPRG00000011183
N
0.711
ENSGACG00000005343
Gasterosteus aculeatus
ENSGACG00000005343
N
0.701