ZC3H18 (Tetraodon nigroviridis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSTNIG00000004767 T03483_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000007423 CCCH ZF 221 244

Links

Other CCCH ZF family RBPs
Other Tetraodon nigroviridis RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZC3H18 Gasterosteus aculeatus ENSGACG00000014025 N 1.000
ZC3H18 Takifugu rubripes ENSTRUG00000017347 N 1.000
ZC3H18 Oryzias latipes ENSORLG00000014056 N 1.000
ZC3H18 Macaca mulatta ENSMMUG00000014323 N 0.917
ZC3H18 Microcebus murinus ENSMICG00000006699 N 0.917
ZC3H18 Gorilla gorilla ENSGGOG00000012514 N 0.917
ZC3H18 Oryctolagus cuniculus ENSOCUG00000001271 N 0.917
ZC3H18 Myotis lucifugus ENSMLUG00000008818 N 0.917
ZC3H18 Procavia capensis ENSPCAG00000009939 N 0.917
ZC3H18 Tupaia belangeri ENSTBEG00000008418 N 0.917
D3ZYL5_RAT Rattus norvegicus ENSRNOG00000028501 N 0.917
ZC3H18 Pteropus vampyrus ENSPVAG00000017349 N 0.917
ZC3H18 Pan troglodytes ENSPTRG00000008456 N 0.917
ENSPPYG00000007639 Pongo pygmaeus ENSPPYG00000007639 N 0.917
ZC3H18 Loxodonta africana ENSLAFG00000015674 N 0.917
Zc3h18 Dipodomys ordii ENSDORG00000010090 N 0.917
LOC100414368 Callithrix jacchus ENSCJAG00000012844 N 0.917
A6QQI7_BOVIN Bos taurus ENSBTAG00000019520 N 0.917
ZC3H18 Homo sapiens ENSG00000158545 N 0.917
ZC3H18 Canis familiaris ENSCAFG00000019884 N 0.917
Ame_R001143 Ailuropoda melanoleuca Ame_R001143 N 0.917
ZC3H18 Tursiops truncatus ENSTTRG00000006225 N 0.917
ZC3H18 Felis catus ENSFCAG00000006654 N 0.917
ZC3H18 Equus caballus ENSECAG00000011599 N 0.917
ZC3H18 Taeniopygia guttata ENSTGUG00000007717 N 0.875
ZC3H18 Ochotona princeps ENSOPRG00000006615 N 0.875
Zc3h18 Mus musculus ENSMUSG00000017478 N 0.875
ZC3H18 Ornithorhynchus anatinus ENSOANG00000011368 N 0.875
ZC3H18 Gallus gallus ENSGALG00000006118 N 0.875
ZC3H18 Macropus eugenii ENSMEUG00000006599 N 0.875
ZC3H18 Meleagris gallopavo ENSMGAG00000007631 N 0.875
ZC3H18 Monodelphis domestica ENSMODG00000004251 N 0.875
ENSCING00000012671 Ciona intestinalis ENSCING00000012671 N 0.792
e_gw1.849.7.1 Daphnia pulex e_gw1.849.7.1 N 0.760
estExt_fgenesh2_pg.C_sca_90284 Lottia gigantea estExt_fgenesh2_pg.C_sca_90284 N 0.750
GA28570-RA Drosophila pseudoobscura FBgn0249930 N 0.708
GL14632 Drosophila persimilis FBgn0152236 N 0.708