CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GL14632
(
Drosophila persimilis
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
FBgn0152236
T03752_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0178739
CCCH ZF
361
384
PKPICRFYTRGQCTWGMSCRFLHP
Links
Other
CCCH ZF
family RBPs
Other
Drosophila persimilis
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GA28570-RA
Drosophila pseudoobscura
FBgn0249930
N
1.000
GD16158
Drosophila simulans
FBgn0085967
N
0.958
CG1677
Drosophila melanogaster
FBgn0029941
N
0.958
AGAP010800
Anopheles gambiae
AGAP010800
N
0.958
GF20935
Drosophila ananassae
FBgn0097940
N
0.958
GM17474
Drosophila sechellia
FBgn0172384
N
0.958
GH24700
Drosophila grimshawi
FBgn0132155
N
0.958
GG17630
Drosophila erecta
FBgn0109852
N
0.958
GI14667
Drosophila mojavensis
FBgn0137418
N
0.958
AAEL000198
Aedes aegypti
AAEL000198
N
0.958
GK16215
Drosophila willistoni
FBgn0218217
N
0.958
GE17532
Drosophila yakuba
FBgn0234991
N
0.958
GJ14740
Drosophila virilis
FBgn0201944
N
0.958
CPIJ000710
Culex quinquefasciatus
CPIJ000710
N
0.917
CpipJ_CPIJ000710
Culex pipiens
CpipJ_CPIJ000710
N
0.917
DGIL_AUG5s7004g11t1
Acyrtosiphon pisum
DGIL_AUG5s7004g11t1
N
0.840
nasonia_NCBI_hmm667174
Nasonia vitripennis
nasonia_NCBI_hmm667174
N
0.800
amel4_ncbi_hmm13965
Apis mellifera
amel4_ncbi_hmm13965
N
0.800
BGIBMGA011662
Bombyx mori
BGIBMGA011662
N
0.720
XP_001193057.1
Strongylocentrotus purpuratus
XP_001193057.1
N
0.708
ZC3H18
Oryzias latipes
ENSORLG00000014056
N
0.708
ZC3H18
Gasterosteus aculeatus
ENSGACG00000014025
N
0.708
Zc3h18
Mus musculus
ENSMUSG00000017478
N
0.708
ZC3H18
Tetraodon nigroviridis
ENSTNIG00000004767
N
0.708
ZC3H18
Takifugu rubripes
ENSTRUG00000017347
N
0.708
XP_001200916.1
Strongylocentrotus purpuratus
XP_001200916.1
N
0.708