GA28570-RA (Drosophila pseudoobscura)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 FBgn0249930 T03826_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0286913 CCCH ZF 410 433

Links

Other CCCH ZF family RBPs
Other Drosophila pseudoobscura RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GL14632 Drosophila persimilis FBgn0152236 N 1.000
AGAP010800 Anopheles gambiae AGAP010800 N 0.958
GH24700 Drosophila grimshawi FBgn0132155 N 0.958
GJ14740 Drosophila virilis FBgn0201944 N 0.958
GI14667 Drosophila mojavensis FBgn0137418 N 0.958
GM17474 Drosophila sechellia FBgn0172384 N 0.958
AAEL000198 Aedes aegypti AAEL000198 N 0.958
CG1677 Drosophila melanogaster FBgn0029941 N 0.958
GE17532 Drosophila yakuba FBgn0234991 N 0.958
GK16215 Drosophila willistoni FBgn0218217 N 0.958
GG17630 Drosophila erecta FBgn0109852 N 0.958
GF20935 Drosophila ananassae FBgn0097940 N 0.958
GD16158 Drosophila simulans FBgn0085967 N 0.958
CPIJ000710 Culex quinquefasciatus CPIJ000710 N 0.917
CpipJ_CPIJ000710 Culex pipiens CpipJ_CPIJ000710 N 0.917
DGIL_AUG5s7004g11t1 Acyrtosiphon pisum DGIL_AUG5s7004g11t1 N 0.840
nasonia_NCBI_hmm667174 Nasonia vitripennis nasonia_NCBI_hmm667174 N 0.800
amel4_ncbi_hmm13965 Apis mellifera amel4_ncbi_hmm13965 N 0.800
BGIBMGA011662 Bombyx mori BGIBMGA011662 N 0.720
ZC3H18 Oryzias latipes ENSORLG00000014056 N 0.708
XP_001200916.1 Strongylocentrotus purpuratus XP_001200916.1 N 0.708
XP_001193057.1 Strongylocentrotus purpuratus XP_001193057.1 N 0.708
ZC3H18 Gasterosteus aculeatus ENSGACG00000014025 N 0.708
Zc3h18 Mus musculus ENSMUSG00000017478 N 0.708
ZC3H18 Tetraodon nigroviridis ENSTNIG00000004767 N 0.708
ZC3H18 Takifugu rubripes ENSTRUG00000017347 N 0.708