ISCW001613 (Ixodes scapularis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ISCW001613 T03910_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ISCW001613-PA CCCH ZF 136 158
ISCW001613-PA CCCH ZF 326 352

Links

Other CCCH ZF family RBPs
Other Ixodes scapularis RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw.394.2.1 Branchiostoma floridae e_gw.394.2.1 N 0.740
UNKL Oryzias latipes ENSORLG00000005070 N 0.706
UNKL Gallus gallus ENSGALG00000006450 N 0.706
UNKL Loxodonta africana ENSLAFG00000018262 N 0.706
UNKL Meleagris gallopavo ENSMGAG00000006920 N 0.706
UNKL Danio rerio ENSDARG00000037838 N 0.706
UNK Monodelphis domestica ENSMODG00000007684 N 0.700
UNK Spermophilus tridecemlineatus ENSSTOG00000013344 N 0.700
UNK Taeniopygia guttata ENSTGUG00000008279 N 0.700
UNK Takifugu rubripes ENSTRUG00000007192 N 0.700
UNK Myotis lucifugus ENSMLUG00000015453 N 0.700
UNK Macaca mulatta ENSMMUG00000013646 N 0.700
Unkl Mus musculus ENSMUSG00000015127 N 0.700
Unk Mus musculus ENSMUSG00000020770 N 0.700
ENSPPYG00000008637 Pongo pygmaeus ENSPPYG00000008637 N 0.700
UNK Pan troglodytes ENSPTRG00000009656 N 0.700
UNK Procavia capensis ENSPCAG00000004504 N 0.700
D4A564_RAT Rattus norvegicus ENSRNOG00000006600 N 0.700
UNK Oryctolagus cuniculus ENSOCUG00000014994 N 0.700
UNK Sus scrofa ENSSSCG00000017201 N 0.700
UNK Pteropus vampyrus ENSPVAG00000008460 N 0.700
UNK Loxodonta africana ENSLAFG00000022662 N 0.700
UNK Anolis carolinensis ENSACAG00000007303 N 0.700
A1A4K6_BOVIN Bos taurus ENSBTAG00000016287 N 0.700
UNK_CANFA Canis familiaris ENSCAFG00000004925 N 0.700
AAEL012456 Aedes aegypti AAEL012456 N 0.700
AAH46725 Xenopus laevis AAH46725 N 0.700
estExt_Genewise1.C_sca_750115 Lottia gigantea estExt_Genewise1.C_sca_750115 N 0.700
Ame_R007986 Ailuropoda melanoleuca Ame_R007986 N 0.700
LOC100390502 Callithrix jacchus ENSCJAG00000014056 N 0.700
UNK Cavia porcellus ENSCPOG00000012679 N 0.700
UNK Gorilla gorilla ENSGGOG00000009203 N 0.700
UNK Macropus eugenii ENSMEUG00000004094 N 0.700
UNK Gallus gallus ENSGALG00000002278 N 0.700
UNK Homo sapiens ENSG00000132478 N 0.700
Unk Dipodomys ordii ENSDORG00000008133 N 0.700
UNK Equus caballus ENSECAG00000024672 N 0.700
UNK Meleagris gallopavo ENSMGAG00000004713 N 0.700