CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
UNK
(
Macaca mulatta
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSMMUG00000013646
T02927_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000017937
CCCH ZF
90
112
CTKYDEATGLCPEGDECPFLHRT
ENSMMUP00000017937
CCCH ZF
294
320
YKSTKCNDMQQSGSCPRGPFCAFAHVE
Links
Other
CCCH ZF
family RBPs
Other
Macaca mulatta
RBPs
59 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A1A4K6_BOVIN
Bos taurus
ENSBTAG00000016287
N
1.000
UNK
Spermophilus tridecemlineatus
ENSSTOG00000013344
N
1.000
UNK
Sus scrofa
ENSSSCG00000017201
N
1.000
UNK_CANFA
Canis familiaris
ENSCAFG00000004925
N
1.000
UNK
Homo sapiens
ENSG00000132478
N
1.000
UNK
Equus caballus
ENSECAG00000024672
N
1.000
LOC100390502
Callithrix jacchus
ENSCJAG00000014056
N
1.000
UNK
Cavia porcellus
ENSCPOG00000012679
N
1.000
Unk
Dipodomys ordii
ENSDORG00000008133
N
1.000
UNK
Pan troglodytes
ENSPTRG00000009656
N
1.000
UNK
Pteropus vampyrus
ENSPVAG00000008460
N
1.000
UNK
Loxodonta africana
ENSLAFG00000022662
N
1.000
ENSPPYG00000008637
Pongo pygmaeus
ENSPPYG00000008637
N
1.000
UNK
Oryctolagus cuniculus
ENSOCUG00000014994
N
1.000
UNK
Gorilla gorilla
ENSGGOG00000009203
N
1.000
UNK
Myotis lucifugus
ENSMLUG00000015453
N
0.980
UNK
Monodelphis domestica
ENSMODG00000007684
N
0.980
UNK
Tursiops truncatus
ENSTTRG00000015890
N
0.980
UNK
Macropus eugenii
ENSMEUG00000004094
N
0.980
Ame_R007986
Ailuropoda melanoleuca
Ame_R007986
N
0.980
UNK
Procavia capensis
ENSPCAG00000004504
N
0.980
D4A564_RAT
Rattus norvegicus
ENSRNOG00000006600
N
0.980
UNK
Felis catus
ENSFCAG00000005757
N
0.961
UNK
Anolis carolinensis
ENSACAG00000007303
N
0.960
UNK
Gallus gallus
ENSGALG00000002278
N
0.960
UNK
Meleagris gallopavo
ENSMGAG00000004713
N
0.960
Unk
Mus musculus
ENSMUSG00000020770
N
0.960
UNK
Taeniopygia guttata
ENSTGUG00000008279
N
0.960
AAH46725
Xenopus laevis
AAH46725
N
0.940
unk
Xenopus tropicalis
ENSXETG00000012578
N
0.920
UNK
Ochotona princeps
ENSOPRG00000012784
N
0.920
UNK
Takifugu rubripes
ENSTRUG00000007192
N
0.900
UNK
Gasterosteus aculeatus
ENSGACG00000005102
N
0.885
UNKL
Cavia porcellus
ENSCPOG00000011846
N
0.863
Unkl
Mus musculus
ENSMUSG00000015127
N
0.860
RGD1565247
Rattus norvegicus
ENSRNOG00000017598
N
0.843
UNKL
Monodelphis domestica
ENSMODG00000016188
N
0.843
UNKL
Loxodonta africana
ENSLAFG00000018262
N
0.843
unk
Danio rerio
ENSDARG00000000935
N
0.840
estExt_Genewise1.C_sca_750115
Lottia gigantea
estExt_Genewise1.C_sca_750115
N
0.840
UNKL
Danio rerio
ENSDARG00000037838
N
0.824
UNKL
Oryzias latipes
ENSORLG00000005070
N
0.824
UNKL
Takifugu rubripes
ENSTRUG00000012086
N
0.824
PHUM219250
Pediculus humanus
PHUM219250
N
0.820
AAEL012456
Aedes aegypti
AAEL012456
N
0.820
UNKL
Homo sapiens
ENSG00000059145
N
0.808
UNKL
Gorilla gorilla
ENSGGOG00000014915
N
0.808
UNKL
Meleagris gallopavo
ENSMGAG00000006920
N
0.804
UNKL
Tetraodon nigroviridis
ENSTNIG00000018588
N
0.804
UNKL
Gallus gallus
ENSGALG00000006450
N
0.804
ENSPPYG00000006950
Pongo pygmaeus
ENSPPYG00000006950
N
0.788
LOC100067623
Equus caballus
ENSECAG00000010641
N
0.788
UNKL
Bos taurus
ENSBTAG00000014126
N
0.788
UNKL
Callithrix jacchus
ENSCJAG00000013151
N
0.788
AGAP000684
Anopheles gambiae
AGAP000684
N
0.784
SNAPOd2T00019464001
Oikopleura dioica
SNAPOd2T00019464001
N
0.780
e_gw.394.2.1
Branchiostoma floridae
e_gw.394.2.1
N
0.780
188708
Helobdella robusta
188708
N
0.700
ISCW001613
Ixodes scapularis
ISCW001613
N
0.700