CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PFL0510c
(
Plasmodium falciparum
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
PFL0510c
T04429_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PFL0510c
CCCH ZF
25
51
FKTKMCPFQKNKNYCLNESSCHYAHSI
PFL0510c
CCCH ZF
61
86
RNTKLCDFVKKKIPCRDINCTFAHDI
PFL0510c
CCCH ZF
98
123
YKSTICSFWGKGKCFNGNKCRFAHGN
Links
Other
CCCH ZF
family RBPs
Other
Plasmodium falciparum
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PKH_130920
Plasmodium knowlesi
PKH_130920
N
0.937
PVX_084540
Plasmodium vivax
PVX_084540
N
0.937
PCHAS_061040
Plasmodium chabaudi
PCHAS_061040
N
0.886
PY03482
Plasmodium yoelii
PY03482
N
0.873
PBANKA_060860
Plasmodium berghei
PBANKA_060860
N
0.873