64152 (Helobdella robusta)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 64152 T04706_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
64152 CCCH ZF 2 28
64152 CCCH ZF 40 66

Links

Other CCCH ZF family RBPs
Other Helobdella robusta RBPs

115 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Q4H2G7_CIOIN Ciona intestinalis ENSCING00000014446 I 0.870
ENSCSAVG00000002923 Ciona savignyi ENSCSAVG00000002923 I 0.870
AAH84197 Xenopus laevis AAH84197 I 0.852
AAD24208 Xenopus laevis AAD24208 I 0.852
XP_782811.1 Strongylocentrotus purpuratus XP_782811.1 I 0.852
XP_002159721.1 Hydra magnipapillata XP_002159721.1 N 0.852
AAI00163 Xenopus laevis AAI00163 I 0.852
zfp36l1 Xenopus tropicalis ENSXETG00000016987 I 0.852
ZFP36L1 Tetraodon nigroviridis ENSTNIG00000002277 I 0.852
ZFP36L1 Oryzias latipes ENSORLG00000011106 I 0.852
XP_001178437.1 Strongylocentrotus purpuratus XP_001178437.1 I 0.852
ZFP36L1 Takifugu rubripes ENSTRUG00000012295 I 0.852
ZFP36L1 Gasterosteus aculeatus ENSGACG00000011271 I 0.852
XP_001175810.1 Strongylocentrotus purpuratus XP_001175810.1 I 0.852
XP_001175665.1 Strongylocentrotus purpuratus XP_001175665.1 I 0.852
gw1.30.59.1 Lottia gigantea gw1.30.59.1 N 0.852
ZFP36L1 Sus scrofa ENSSSCG00000002302 I 0.833
ZFP36L1 Dasypus novemcinctus ENSDNOG00000005159 I 0.833
A7MB98_BOVIN Bos taurus ENSBTAG00000025434 I 0.833
Zfp36l1 Dipodomys ordii ENSDORG00000008348 I 0.833
ZFP36L1 Spermophilus tridecemlineatus ENSSTOG00000009758 I 0.833
ENSACAG00000005547 Anolis carolinensis ENSACAG00000005547 I 0.833
Zfp36l1 Mus musculus ENSMUSG00000021127 I 0.833
gw1.42.93.1 Daphnia pulex gw1.42.93.1 N 0.833
zfp36l1a Danio rerio ENSDARG00000016154 I 0.833
ZFP36L1 Cavia porcellus ENSCPOG00000025078 I 0.833
LOC100405281 Callithrix jacchus ENSCJAG00000015116 I 0.833
LOC100063597 Equus caballus ENSECAG00000018860 I 0.833
TISB_RAT Rattus norvegicus ENSRNOG00000030024 I 0.833
ZFP36L1 Canis familiaris ENSCAFG00000016497 I 0.833
estExt_fgenesh2_pg.C_680108 Branchiostoma floridae estExt_fgenesh2_pg.C_680108 I 0.833
ZFP36L1 Loxodonta africana ENSLAFG00000028594 I 0.833
ZFP36L1 Oryctolagus cuniculus ENSOCUG00000003168 I 0.833
ZFP36L1 Macropus eugenii ENSMEUG00000003070 I 0.833
e_gw1.40.110.1 Trichoplax adhaerens e_gw1.40.110.1 I 0.833
Ame_R004924 Ailuropoda melanoleuca Ame_R004924 I 0.833
ZFP36L1 Pteropus vampyrus ENSPVAG00000011686 I 0.833
ZFP36L1 Tursiops truncatus ENSTTRG00000003475 I 0.833
XR_022888.1 Pan troglodytes ENSPTRG00000030712 I 0.833
ZFP36L1 Tarsius syrichta ENSTSYG00000009284 I 0.833
ZFP36L1 Homo sapiens ENSG00000185650 I 0.833
ENSPPYG00000005933 Pongo pygmaeus ENSPPYG00000005933 I 0.833
ZFP36L1 Procavia capensis ENSPCAG00000005383 I 0.833
zfp36l1b Danio rerio ENSDARG00000021443 I 0.815
ZFP36L2 Ornithorhynchus anatinus ENSOANG00000002848 I 0.815
zfp36l2 Danio rerio ENSDARG00000021806 I 0.815
gw1.534.24.1 Capitella teleta gw1.534.24.1 I 0.815
ZFP36L2 Tetraodon nigroviridis ENSTNIG00000017103 I 0.815
ZFP36L2 Cavia porcellus ENSCPOG00000022038 I 0.815
BAC54909 Xenopus laevis BAC54909 I 0.815
e_gw.346.37.1 Nematostella vectensis e_gw.346.37.1 I 0.815
amel4_ncbi_hmm10964 Apis mellifera amel4_ncbi_hmm10964 I 0.815
ZFP36L1 Taeniopygia guttata ENSTGUG00000011494 I 0.815
Q805B4 Xenopus laevis Q805B4 I 0.815
AAH84221 Xenopus laevis AAH84221 I 0.815
AAD24209 Xenopus laevis AAD24209 I 0.815
Zfp36l2 Mus musculus ENSMUSG00000045817 I 0.796
ZFP36L2 Tursiops truncatus ENSTTRG00000006356 I 0.796
zfp36l2 Xenopus tropicalis ENSXETG00000009274 I 0.796
ENSPPYG00000012458 Pongo pygmaeus ENSPPYG00000012458 I 0.796
ENSSSCG00000008460 Sus scrofa ENSSSCG00000008460 I 0.796
Zfp36l2 Rattus norvegicus ENSRNOG00000005067 I 0.796
ZFP36L2 Sus scrofa ENSSSCG00000008461 I 0.796
ZFP36L2 Tupaia belangeri ENSTBEG00000012370 I 0.796
ZFP36L2 Pan troglodytes ENSPTRG00000011870 I 0.796
ZFP36L2 Takifugu rubripes ENSTRUG00000006923 I 0.796
ZFP36L2 Macropus eugenii ENSMEUG00000010649 I 0.796
LOC100386590 Callithrix jacchus ENSCJAG00000014571 I 0.796
Q1JP65_BOVIN Bos taurus ENSBTAG00000003553 I 0.796
nasonia_NCBI_hmm9264 Nasonia vitripennis nasonia_NCBI_hmm9264 I 0.796
ZFP36L2 Monodelphis domestica ENSMODG00000000407 I 0.796
AGAP010954 Anopheles gambiae AGAP010954 N 0.796
ZFP36L2 Homo sapiens ENSG00000152518 I 0.796
Q7ZXW9 Xenopus laevis Q7ZXW9 I 0.796
ZFP36L2 Gorilla gorilla ENSGGOG00000001402 I 0.796
AAH44086 Xenopus laevis AAH44086 I 0.796
ZFP36L2 Myotis lucifugus ENSMLUG00000015588 I 0.796
ZFP36L2 Microcebus murinus ENSMICG00000010318 I 0.796
ZFP36L2 Loxodonta africana ENSLAFG00000004265 I 0.796
ZFP36L2 Canis familiaris ENSCAFG00000002438 I 0.796
Ame_R000168 Ailuropoda melanoleuca Ame_R000168 I 0.796
ZFP36L2 Anolis carolinensis ENSACAG00000014740 I 0.796
CpipJ_CPIJ018734 Culex pipiens CpipJ_CPIJ018734 I 0.778
BGIBMGA008337 Bombyx mori BGIBMGA008337 I 0.778
ENSTNIG00000019802 Tetraodon nigroviridis ENSTNIG00000019802 I 0.778
CPIJ018734 Culex quinquefasciatus CPIJ018734 I 0.778
AAEL002308 Aedes aegypti AAEL002308 I 0.778
ENSORLG00000000589 Oryzias latipes ENSORLG00000000589 I 0.778
ZFP36L2 Procavia capensis ENSPCAG00000010765 I 0.778
ENSTRUG00000003178 Takifugu rubripes ENSTRUG00000003178 I 0.759
GH17894 Drosophila grimshawi FBgn0125362 N 0.759
GI21684 Drosophila mojavensis FBgn0144414 N 0.759
GK25600 Drosophila willistoni FBgn0227559 N 0.759
GJ15863 Drosophila virilis FBgn0203050 N 0.759
Tis11 Drosophila melanogaster FBgn0011837 N 0.741
Zfp36l3 Mus musculus ENSMUSG00000059334 I 0.741
GA17935-RA Drosophila pseudoobscura FBgn0077944 N 0.741
GF21384 Drosophila ananassae FBgn0098386 N 0.741
ZFP36L2 Felis catus ENSFCAG00000013462 N 0.741
GG17735 Drosophila erecta FBgn0109957 N 0.741
Aqu1.221345 Amphimedon queenslandica Aqu1.221345 I 0.741
Zfp36l3 Rattus norvegicus ENSRNOG00000029788 I 0.741
GE17025 Drosophila yakuba FBgn0234511 N 0.741
GL13141 Drosophila persimilis FBgn0150747 N 0.741
GM11580 Drosophila sechellia FBgn0166523 N 0.741
CABZ01070258.1 Danio rerio ENSDARG00000040503 I 0.741
ENSGACG00000013400 Gasterosteus aculeatus ENSGACG00000013400 I 0.741
PTSG_01604 Salpingoeca rosetta PTSG_01604 N 0.722
138584 Helobdella robusta 138584 N 0.704
ENSORLG00000008378 Oryzias latipes ENSORLG00000008378 I 0.704
ZFP36 Gasterosteus aculeatus ENSGACG00000008344 I 0.704
ENSGACG00000008351 Gasterosteus aculeatus ENSGACG00000008351 I 0.704
ZFP36 Takifugu rubripes ENSTRUG00000002023 I 0.704
AMAG_15989 Allomyces macrogynus AMAG_15989 N 0.704
AMAG_06814 Allomyces macrogynus AMAG_06814 N 0.704