fgenesh1_pg.C_scaffold_102000045 (Daphnia pulex)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 fgenesh1_pg.C_scaffold_102000045 T05208_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_102000045 CCCH ZF 78 97

Links

Other CCCH ZF family RBPs
Other Daphnia pulex RBPs

4 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava26644.m1 Manihot esculenta cassava26644.m1 N 0.750
PTTG_01394 Puccinia triticina PTTG_01394 N 0.727
PGTG_01325 Puccinia graminis PGTG_01325 N 0.727
AB06332.1 Alternaria brassicicola AB06332.1 N 0.714