PTTG_01394 (Puccinia triticina)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 PTTG_01394 T01545_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PTTG_01394T0 CCCH ZF 183 204

Links

Other CCCH ZF family RBPs
Other Puccinia triticina RBPs

152 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PGTG_01325 Puccinia graminis PGTG_01325 N 1.000
estExt_fgenesh2_pg.C_50080 Agaricus bisporus estExt_fgenesh2_pg.C_50080 N 0.815
e_gw1.5.501.1 Pleurotus ostreatus e_gw1.5.501.1 N 0.815
estExt_fgenesh2_kg.C_62064 Serpula lacrymans estExt_fgenesh2_kg.C_62064 N 0.815
CMU_031370 Cryptosporidium muris CMU_031370 N 0.815
gww2.6.423.1 Phanerochaete chrysosporium gww2.6.423.1 N 0.815
UM05163 Ustilago maydis UM05163 N 0.815
estExt_GeneWisePlus_human.C_50103 Laccaria bicolor estExt_GeneWisePlus_human.C_50103 N 0.815
EDO07311.1 Babesia bovis EDO07311.1 N 0.778
TP01_0812 Theileria parva TP01_0812 N 0.778
TA05795 Theileria annulata TA05795 N 0.778
e_gw1.8.388.1 Schizophyllum commune e_gw1.8.388.1 N 0.778
PTSG_02658 Salpingoeca rosetta PTSG_02658 N 0.778
estExt_fgenesh2_pg.C_30366 Heterobasidion annosum estExt_fgenesh2_pg.C_30366 N 0.778
CC1G_03236 Coprinopsis cinerea CC1G_03236 N 0.778
gw1.63.49.1 Postia placenta gw1.63.49.1 N 0.778
gw1.2.524.1 Monosiga brevicollis gw1.2.524.1 N 0.778
gw1.9.174.1 Postia placenta gw1.9.174.1 N 0.778
cassava26644.m1 Manihot esculenta cassava26644.m1 N 0.773
AB06332.1 Alternaria brassicicola AB06332.1 N 0.773
GF17636 Drosophila ananassae FBgn0094654 N 0.741
GG23724 Drosophila erecta FBgn0115865 N 0.741
CG4973 Drosophila melanogaster FBgn0038772 N 0.741
estExt_Genewise1.C_340021 Melampsora laricis populina estExt_Genewise1.C_340021 N 0.741
estExt_gwp_1W.C_30096 Chlamydomonas reinhardtii estExt_gwp_1W.C_30096 N 0.741
fgenesh2_pg.C_scaffold_6000249 Selaginella moellendorfii fgenesh2_pg.C_scaffold_6000249 N 0.741
GA18564-RA Drosophila pseudoobscura FBgn0064425 N 0.741
GK22373 Drosophila willistoni FBgn0067112 N 0.741
GH22886 Drosophila grimshawi FBgn0130343 N 0.741
estExt_Genewise1Plus.C_80076 Volvox carteri estExt_Genewise1Plus.C_80076 N 0.741
cwf24 Schizosaccharomyces pombe SPBC13E7.02 N 0.741
ISCW023200 Ixodes scapularis ISCW023200 N 0.741
185736 Helobdella robusta 185736 N 0.741
AGAP007068 Anopheles gambiae AGAP007068 N 0.741
CpipJ_CPIJ004936 Culex pipiens CpipJ_CPIJ004936 N 0.741
AAEL001778 Aedes aegypti AAEL001778 N 0.741
CAOG_06860 Capsaspora owczarzaki CAOG_06860 N 0.741
GSVIVG00027082001 Vitis vinifera GSVIVG00027082001 N 0.741
CPIJ004936 Culex quinquefasciatus CPIJ004936 N 0.741
GD19337 Drosophila simulans FBgn0190839 N 0.741
GM17684 Drosophila sechellia FBgn0172592 N 0.741
GL12088 Drosophila persimilis FBgn0149696 N 0.741
GI22714 Drosophila mojavensis FBgn0145441 N 0.741
Aqu1.217710 Amphimedon queenslandica Aqu1.217710 N 0.741
RNF113A Choloepus hoffmanni ENSCHOG00000008711 N 0.741
GE25648 Drosophila yakuba FBgn0242710 N 0.741
fgenesh1_pg.C_scaffold_102000045 Daphnia pulex fgenesh1_pg.C_scaffold_102000045 N 0.727
estExt_Genewise1.C_sca_120492 Lottia gigantea estExt_Genewise1.C_sca_120492 N 0.704
Chro.60383 Cryptosporidium hominis Chro.60383 N 0.704
e_gw1.2.1336.1 Trichoplax adhaerens e_gw1.2.1336.1 N 0.704
Cucsa.060530 Cucumis sativus Cucsa.060530 N 0.704
29733.m000763 Ricinus communis 29733.m000763 N 0.704
estExt_fgenesh1_pg.C_5430007 Capitella teleta estExt_fgenesh1_pg.C_5430007 N 0.704
29733.m000748 Ricinus communis 29733.m000748 N 0.704
estExt_Genewise1.C_120284 Chlorella NC64A estExt_Genewise1.C_120284 N 0.704
PASA_GEN_19100012 Daphnia pulex PASA_GEN_19100012 N 0.704
SAKL0H22880g Lachancea kluyveri SAKL0H22880g N 0.704
XP_002169878.1 Hydra magnipapillata XP_002169878.1 N 0.704
ppa009728m Prunus persica ppa009728m N 0.704
MDP0000274000 Malus x domestica MDP0000274000 N 0.704
MDP0000182690 Malus x domestica MDP0000182690 N 0.704
MDP0000202598 Malus x domestica MDP0000202598 N 0.704
XP_002490540.1 Pichia pastoris XP_002490540.1 N 0.704
AAH97882 Xenopus laevis AAH97882 N 0.704
HCAG_02941 Histoplasma capsulatum HCAG_02941 N 0.704
PITG_04905 Phytophthora infestans PITG_04905 N 0.704
BDBG_04068 Blastomyces dermatitidis BDBG_04068 N 0.704
AAR97523 Xenopus laevis AAR97523 N 0.704
AAI33788 Xenopus laevis AAI33788 N 0.704
Kwal_17638 Kluyveromyces waltii Kwal_17638 N 0.704
GSTUMT00004845001 Tuber melanosporum GSTUMT00004845001 N 0.704
cgd6_3300 Cryptosporidium parvum cgd6_3300 N 0.704
s_444298 Phytophthora sojae s_444298 N 0.704
mgf009866m Mimulus guttatus mgf009866m N 0.704
Glyma05g37520.1 Glycine max Glyma05g37520.1 N 0.704
estExt_gwp_gw1.C_1140075 Physcomitrella patens estExt_gwp_gw1.C_1140075 N 0.704
Glyma03g02920.1 Glycine max Glyma03g02920.1 N 0.704
GRMZM2G373653 Zea mays GRMZM2G373653 N 0.704
EFA78387.1 Polysphondylium pallidum EFA78387.1 N 0.704
Ame_R010811 Ailuropoda melanoleuca Ame_R010811 N 0.704
chr1.CM0088.900.nc Lotus japonicus chr1.CM0088.900.nc N 0.704
BGIBMGA000186 Bombyx mori BGIBMGA000186 N 0.704
Medtr7g132670 Medicago truncatula Medtr7g132670 N 0.704
Medtr7g132570 Medicago truncatula Medtr7g132570 N 0.704
estExt_GenewiseH_1.C_3140043 Nematostella vectensis estExt_GenewiseH_1.C_3140043 N 0.704
GJ23438 Drosophila virilis FBgn0210538 N 0.704
rnf113a Danio rerio ENSDARG00000037930 N 0.704
RNF113A Dasypus novemcinctus ENSDNOG00000015321 N 0.704
LOC100058519 Equus caballus ENSECAG00000003934 N 0.704
ENSCSAVG00000006210 Ciona savignyi ENSCSAVG00000006210 N 0.704
LOC100388689 Callithrix jacchus ENSCJAG00000022327 N 0.704
NP_001027830.1 Ciona intestinalis ENSCING00000009197 N 0.704
RNF113B Callithrix jacchus ENSCJAG00000004501 N 0.704
ENSECAG00000004638 Equus caballus ENSECAG00000004638 N 0.704
RNF113A Echinops telfairi ENSETEG00000018346 N 0.704
RNF113A Gorilla gorilla ENSGGOG00000002324 N 0.704
RNF113B Gorilla gorilla ENSGGOG00000023052 N 0.704
Q67ER3_CHICK Gallus gallus ENSGALG00000000538 N 0.704
RNF113B Gasterosteus aculeatus ENSGACG00000009738 N 0.704
RNF113A Homo sapiens ENSG00000125352 N 0.704
RNF113B Homo sapiens ENSG00000139797 N 0.704
XM_538154.2 Canis familiaris ENSCAFG00000018430 N 0.704
LOC518027 Bos taurus ENSBTAG00000008684 N 0.704
PK05761.1 Cannabis sativa PK05761.1 N 0.704
amel4_ncbi_hmm8953 Apis mellifera amel4_ncbi_hmm8953 N 0.704
DGIL_AUG5s12567g4t1 Acyrtosiphon pisum DGIL_AUG5s12567g4t1 N 0.704
SPRG_14175 Saprolegnia parasitica SPRG_14175 N 0.704
SPRG_10807 Saprolegnia parasitica SPRG_10807 N 0.704
SOCG_00229 Schizosaccharomyces octosporus SOCG_00229 N 0.704
SPOG_02814 Schizosaccharomyces cryophilus SPOG_02814 N 0.704
nasonia_NCBI_hmm132664 Nasonia vitripennis nasonia_NCBI_hmm132664 N 0.704
AT1G01350 Arabidopsis thaliana AT1G01350-TAIR-G N 0.704
ENSACAG00000012485 Anolis carolinensis ENSACAG00000012485 N 0.704
R113A_BOVIN Bos taurus ENSBTAG00000006034 N 0.704
ANIA_07755 Aspergillus nidulans CADANIAG00000892 N 0.704
BRADI3G09570 Brachypodium distachyon BRADI3G09570 N 0.704
AT5G06420 Arabidopsis thaliana AT5G06420-TAIR-G N 0.704
BGIOSIBCE006607 Oryza indica BGIOSIBCE006607 N 0.704
RNF113A Loxodonta africana ENSLAFG00000013906 N 0.704
ENSMEUG00000001855 Macropus eugenii ENSMEUG00000001855 N 0.704
RNF113A Taeniopygia guttata ENSTGUG00000001947 N 0.704
RNF113B Tetraodon nigroviridis ENSTNIG00000014938 N 0.704
RNF113B Takifugu rubripes ENSTRUG00000011142 N 0.704
RNF113A Tupaia belangeri ENSTBEG00000012687 N 0.704
ENSSSCG00000012616 Sus scrofa ENSSSCG00000012616 N 0.704
ENSSARG00000010436 Sorex araneus ENSSARG00000010436 N 0.704
ENSSSCG00000012610 Sus scrofa ENSSSCG00000012610 N 0.704
RNF113A Vicugna pacos ENSVPAG00000004521 N 0.704
rnf113a Xenopus tropicalis ENSXETG00000002042 N 0.704
SB04G009270 Sorghum bicolor Sb04g009270 N 0.704
XM_002892025.1 Arabidopsis lyrata scaffold_100114.1 N 0.704
PHUM169980 Pediculus humanus PHUM169980 N 0.704
PHATRDRAFT_12516 Phaeodactylum tricornutum Phatr12516 N 0.704
SJAG_03112 Schizosaccharomyces japonicus SJAG_03112 N 0.704
LOC_Os02g19804 Oryza sativa LOC_Os02g19804 N 0.704
Rnf113a1 Rattus norvegicus ENSRNOG00000034040 N 0.704
RNF113A Pan troglodytes ENSPTRG00000022231 N 0.704
RNF113B Macaca mulatta ENSMMUG00000022250 N 0.704
Rnf113a1 Mus musculus ENSMUSG00000036537 N 0.704
RNF113A Macaca mulatta ENSMMUG00000020223 N 0.704
ENSMLUG00000010856 Myotis lucifugus ENSMLUG00000010856 N 0.704
ENSMGAG00000001753 Meleagris gallopavo ENSMGAG00000001753 N 0.704
RNF113A Microcebus murinus ENSMICG00000001750 N 0.704
ENSOANG00000002592 Ornithorhynchus anatinus ENSOANG00000002592 N 0.704
RNF113A Oryctolagus cuniculus ENSOCUG00000016207 N 0.704
ENSPPYG00000020676 Pongo pygmaeus ENSPPYG00000020676 N 0.704
RNF113B Pan troglodytes ENSPTRG00000005987 N 0.704
ENSPPYG00000005460 Pongo pygmaeus ENSPPYG00000005460 N 0.704
RNF113A Procavia capensis ENSPCAG00000014633 N 0.704
RNF113A Otolemur garnettii ENSOGAG00000016171 N 0.704
Q67EQ7_ORYLA Oryzias latipes ENSORLG00000002442 N 0.704
THAPSDRAFT_25179 Thalassiosira pseudonana Thaps25179 N 0.704