gw1.2.379.1 (Trichoderma atroviride)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 gw1.2.379.1 T05526_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.2.379.1 CCCH ZF 171 197

Links

Other CCCH ZF family RBPs
Other Trichoderma atroviride RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PF14_0416 Plasmodium falciparum PF14_0416 N 0.741
PY01907 Plasmodium yoelii PY01907 N 0.741
e_gw1.32.54.1 Fragilariopsis cylindrus e_gw1.32.54.1 N 0.741
PBANKA_130770 Plasmodium berghei PBANKA_130770 N 0.741
PCHAS_131090 Plasmodium chabaudi PCHAS_131090 N 0.741
FOXG_03625 Fusarium oxysporum FOXG_03625 N 0.741
THAPSDRAFT_25179 Thalassiosira pseudonana Thaps25179 N 0.741
PHATRDRAFT_12516 Phaeodactylum tricornutum Phatr12516 N 0.741
fgenesh1_pg.sca_2_chr3_3_0000871 Nectria haematococca fgenesh1_pg.sca_2_chr3_3_0000871 N 0.704
PVX_118300 Plasmodium vivax PVX_118300 N 0.704
PKH_126250 Plasmodium knowlesi PKH_126250 N 0.704
FGSG_08901 Fusarium graminearum FGSG_08901 N 0.704