Scas_Contig705.28 (Saccharomyces castellii)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Scas_Contig705.28 T05833_0.6 SGD (2003-Oct-3)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig705.28 CCCH ZF 30 59
Scas_Contig705.28 CCCH ZF 65 88
Scas_Contig705.28 CCCH ZF 91 117
Scas_Contig705.28 CCCH ZF 120 145
Scas_Contig705.28 CCCH ZF 144 168

Links

Other CCCH ZF family RBPs
Other Saccharomyces castellii RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Skud_Contig1473.3 Saccharomyces kudriavzevii Skud_Contig1473.3 N 0.712
YTH1 Saccharomyces cerevisiae YPR107C N 0.705
25937_YPR107C Saccharomyces bayanus 25937_YPR107C N 0.705
23053_YPR107C Saccharomyces paradoxus 23053_YPR107C N 0.705
22646_YPR107C Saccharomyces mikatae 22646_YPR107C N 0.705