AB03376.1 (Alternaria brassicicola)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 AB03376.1 T05925_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AB03376.1 CCCH ZF 281 303
AB03376.1 CCCH ZF 304 328

Links

Other CCCH ZF family RBPs
Other Alternaria brassicicola RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PTRG_07550 Pyrenophora tritici repentis PTRG_07550 N 0.979
estExt_Genewise1Plus.C_30598 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_30598 N 0.958
AO090009000286 Aspergillus oryzae CADAORAG00003756 N 0.700
ANIA_03578 Aspergillus nidulans CADANIAG00005166 N 0.700
ATEG_03185 Aspergillus terreus CADATEAG00008323 N 0.700
An01g08600 Aspergillus niger CADANGAG00000860 N 0.700
AFLA_051800 Aspergillus flavus CADAFLAG00011171 N 0.700
CIMG_00632 Coccidioides immitis CIMG_00632 N 0.700
CPSG_09242 Coccidioides posadasii CPSG_09242 N 0.700
UREG_00636 Uncinocarpus reesii UREG_00636 N 0.700
fgenesh1_pm.00009_#_468 Aspergillus carbonarius fgenesh1_pm.00009_#_468 N 0.700