An01g08600 (Aspergillus niger)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 CADANGAG00000860 T02052_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00000833 CCCH ZF 281 305
CADANGAP00000833 CCCH ZF 309 330

Links

Other CCCH ZF family RBPs
Other Aspergillus niger RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pm.00009_#_468 Aspergillus carbonarius fgenesh1_pm.00009_#_468 N 1.000
AFLA_051800 Aspergillus flavus CADAFLAG00011171 N 1.000
ATEG_03185 Aspergillus terreus CADATEAG00008323 N 1.000
AO090009000286 Aspergillus oryzae CADAORAG00003756 N 1.000
ANIA_03578 Aspergillus nidulans CADANIAG00005166 N 0.979
ACLA_052020 Aspergillus clavatus CADACLAG00005073 N 0.979
AFUA_4G13020 Aspergillus fumigatus CADAFUAG00007954 N 0.957
NFIA_103330 Neosartorya fischeri CADNFIAG00010242 N 0.957
Pc22g02970 Penicillium chrysogenum Pc22g02970 N 0.939
CIMG_00632 Coccidioides immitis CIMG_00632 N 0.936
CPSG_09242 Coccidioides posadasii CPSG_09242 N 0.936
UREG_00636 Uncinocarpus reesii UREG_00636 N 0.936
PMAA_081480 Penicillium marneffei PMAA_081480 N 0.915
HCAG_07022 Histoplasma capsulatum HCAG_07022 N 0.915
BDBG_02229 Blastomyces dermatitidis BDBG_02229 N 0.915
ARB_00116 Arthroderma benhamiae ARB_00116 N 0.894
TERG_07499 Trichophyton rubrum TERG_07499 N 0.894
TRV_06656 Trichophyton verrucosum TRV_06656 N 0.894
PABG_03020 Paracoccidioides brasiliensis PABG_03020 N 0.872
MGYG_01632 Microsporum gypseum MGYG_01632 N 0.872
MCYG_01086 Microsporum canis MCYG_01086 N 0.872
BC1G_00189 Botrytis cinerea BC1G_00189 N 0.851
SS1G_04219 Sclerotinia sclerotiorum SS1G_04219 N 0.851
GLRG_01552 Colletotrichum graminicola GLRG_01552 N 0.812
fgenesh1_pm.sca_3_chr4_2_0000335 Nectria haematococca fgenesh1_pm.sca_3_chr4_2_0000335 N 0.812
FGSG_12995 Fusarium graminearum FGSG_12995 N 0.812
VDAG_04286 Verticillium dahliae VDAG_04286 N 0.792
estExt_Genewise1Plus.C_13473 Trichoderma atroviride estExt_Genewise1Plus.C_13473 N 0.792
FOXG_01987 Fusarium oxysporum FOXG_01987 N 0.792
FVEG_05147 Fusarium verticillioides FVEG_05147 N 0.792
fgenesh1_pg.C_scaffold_7000377 Trichoderma virens fgenesh1_pg.C_scaffold_7000377 N 0.792
fgenesh2_pm.1_#_1003 Thielavia terrestris fgenesh2_pm.1_#_1003 N 0.787
e_gw1.5.87.1 Trichoderma reesei e_gw1.5.87.1 N 0.771
NCU07418 Neurospora crassa NCU07418 N 0.766
estExt_Genewise1.C_290124 Neurospora tetrasperma estExt_Genewise1.C_290124 N 0.766
estExt_Genewise1Plus.C_40825 Neurospora discreta estExt_Genewise1Plus.C_40825 N 0.766
Pa_1_10420 Podospora anserina Pa_1_10420 N 0.766
MGG_04405 Magnaporthe oryzae MGG_04405 N 0.723
GSTUMT00011195001 Tuber melanosporum GSTUMT00011195001 N 0.720
PTRG_07550 Pyrenophora tritici repentis PTRG_07550 N 0.700
AB03376.1 Alternaria brassicicola AB03376.1 N 0.700