CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ANIA_03578
(
Aspergillus nidulans
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
CADANIAG00005166
T02064_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANIAP00005166
CCCH ZF
282
306
SPVVCKYWLSTGQCLRADCRFSHDL
CADANIAP00005166
CCCH ZF
309
331
HLCKYWVMGNCLAGDGCPFSHDP
Links
Other
CCCH ZF
family RBPs
Other
Aspergillus nidulans
RBPs
41 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh1_pm.00009_#_468
Aspergillus carbonarius
fgenesh1_pm.00009_#_468
N
0.979
AO090009000286
Aspergillus oryzae
CADAORAG00003756
N
0.979
An01g08600
Aspergillus niger
CADANGAG00000860
N
0.979
AFLA_051800
Aspergillus flavus
CADAFLAG00011171
N
0.979
ATEG_03185
Aspergillus terreus
CADATEAG00008323
N
0.979
Pc22g02970
Penicillium chrysogenum
Pc22g02970
N
0.959
ACLA_052020
Aspergillus clavatus
CADACLAG00005073
N
0.958
NFIA_103330
Neosartorya fischeri
CADNFIAG00010242
N
0.938
AFUA_4G13020
Aspergillus fumigatus
CADAFUAG00007954
N
0.938
UREG_00636
Uncinocarpus reesii
UREG_00636
N
0.917
CPSG_09242
Coccidioides posadasii
CPSG_09242
N
0.917
CIMG_00632
Coccidioides immitis
CIMG_00632
N
0.917
BDBG_02229
Blastomyces dermatitidis
BDBG_02229
N
0.896
PMAA_081480
Penicillium marneffei
PMAA_081480
N
0.896
HCAG_07022
Histoplasma capsulatum
HCAG_07022
N
0.896
TERG_07499
Trichophyton rubrum
TERG_07499
N
0.875
ARB_00116
Arthroderma benhamiae
ARB_00116
N
0.875
TRV_06656
Trichophyton verrucosum
TRV_06656
N
0.875
PABG_03020
Paracoccidioides brasiliensis
PABG_03020
N
0.854
MGYG_01632
Microsporum gypseum
MGYG_01632
N
0.854
MCYG_01086
Microsporum canis
MCYG_01086
N
0.854
BC1G_00189
Botrytis cinerea
BC1G_00189
N
0.833
fgenesh1_pm.sca_3_chr4_2_0000335
Nectria haematococca
fgenesh1_pm.sca_3_chr4_2_0000335
N
0.833
SS1G_04219
Sclerotinia sclerotiorum
SS1G_04219
N
0.833
GLRG_01552
Colletotrichum graminicola
GLRG_01552
N
0.833
FGSG_12995
Fusarium graminearum
FGSG_12995
N
0.833
fgenesh1_pg.C_scaffold_7000377
Trichoderma virens
fgenesh1_pg.C_scaffold_7000377
N
0.812
estExt_Genewise1Plus.C_13473
Trichoderma atroviride
estExt_Genewise1Plus.C_13473
N
0.812
FOXG_01987
Fusarium oxysporum
FOXG_01987
N
0.812
VDAG_04286
Verticillium dahliae
VDAG_04286
N
0.812
FVEG_05147
Fusarium verticillioides
FVEG_05147
N
0.812
e_gw1.5.87.1
Trichoderma reesei
e_gw1.5.87.1
N
0.792
fgenesh2_pm.1_#_1003
Thielavia terrestris
fgenesh2_pm.1_#_1003
N
0.771
NCU07418
Neurospora crassa
NCU07418
N
0.750
estExt_Genewise1Plus.C_40825
Neurospora discreta
estExt_Genewise1Plus.C_40825
N
0.750
Pa_1_10420
Podospora anserina
Pa_1_10420
N
0.750
estExt_Genewise1.C_290124
Neurospora tetrasperma
estExt_Genewise1.C_290124
N
0.750
GSTUMT00011195001
Tuber melanosporum
GSTUMT00011195001
N
0.720
MGG_04405
Magnaporthe oryzae
MGG_04405
N
0.708
AB03376.1
Alternaria brassicicola
AB03376.1
N
0.700
PTRG_07550
Pyrenophora tritici repentis
PTRG_07550
N
0.700