LjSGA_017774.1 (Lotus japonicus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 LjSGA_017774.1 T06264_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_017774.1 CCCH ZF 19 45

Links

Other CCCH ZF family RBPs
Other Lotus japonicus RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LjSGA_129379.1 Lotus japonicus LjSGA_129379.1 N 1.000
LjSGA_036568.1 Lotus japonicus LjSGA_036568.1 N 0.963
GRMZM2G475017 Zea mays GRMZM2G475017 N 0.815
GRMZM2G036837 Zea mays GRMZM2G036837 N 0.815
cassava25492.m1 Manihot esculenta cassava25492.m1 N 0.741
PDK_20s1508231g002 Phoenix dactylifera PDK_20s1508231g002 N 0.704