cassava25492.m1 (Manihot esculenta)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 cassava25492.m1 T04770_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava25492.m1 CCCH ZF 50 76

Links

Other CCCH ZF family RBPs
Other Manihot esculenta RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PDK_20s1508231g002 Phoenix dactylifera PDK_20s1508231g002 N 0.815
LjSGA_129379.1 Lotus japonicus LjSGA_129379.1 N 0.741
LjSGA_036568.1 Lotus japonicus LjSGA_036568.1 N 0.741
LjSGA_017774.1 Lotus japonicus LjSGA_017774.1 N 0.741
GSVIVG00019118001 Vitis vinifera GSVIVG00019118001 N 0.704
POPTR_0019s08040 Populus trichocarpa POPTR_0019s08040 N 0.704
LjSGA_052738.1 Lotus japonicus LjSGA_052738.1 N 0.704
GRMZM2G475017 Zea mays GRMZM2G475017 N 0.704