PDK_20s1487951g001 (Phoenix dactylifera)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 PDK_20s1487951g001 T06476_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1487951g001 CCCH ZF 63 86

Links

Other CCCH ZF family RBPs
Other Phoenix dactylifera RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SB03G009590 Sorghum bicolor Sb03g009590 N 0.840
GRMZM2G024655 Zea mays GRMZM2G024655 N 0.800
LOC_Os01g14870 Oryza sativa LOC_Os01g14870 N 0.792
BGIOSIBCE001150 Oryza indica BGIOSIBCE001150 N 0.792
BRADI2G08905 Brachypodium distachyon BRADI2G08905 N 0.769
GSVIVG00031300001 Vitis vinifera GSVIVG00031300001 N 0.704