ZCRB1 (Ochotona princeps)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		ENSOPRG00000011095 T07307_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZCRB1
M085_0.6 		Homo sapiens GRHUUAA RNAcompete
Ray et al.(2013)
RNCMPT00087 		0.798
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000010120 RRM 1 54
ENSOPRP00000010120 CCHC ZF 77 94

Links

Other CCHC ZF,RRM family RBPs
Other Ochotona princeps RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZCRB1 Otolemur garnettii ENSOGAG00000013178 I 0.946
ENSOCUG00000013664 Oryctolagus cuniculus ENSOCUG00000013664 N 0.847
ZCRB1 Macropus eugenii ENSMEUG00000003563 N 0.806
LOC100410115 Callithrix jacchus ENSCJAG00000017749 I 0.798
ZCRB1 Homo sapiens ENSG00000139168 D 0.798
ZCRB1 Gorilla gorilla ENSGGOG00000015647 I 0.798
Ame_R009995 Ailuropoda melanoleuca Ame_R009995 I 0.798
ZCRB1 Cavia porcellus ENSCPOG00000014554 I 0.798
ZCRB1 Pan troglodytes ENSPTRG00000004838 I 0.798
ENSPPYG00000004422 Pongo pygmaeus ENSPPYG00000004422 I 0.798
Zcrb1 Mus musculus ENSMUSG00000022635 I 0.787
ENSOCUG00000026539 Oryctolagus cuniculus ENSOCUG00000026539 I 0.787
ZCRB1 Vicugna pacos ENSVPAG00000012040 I 0.787
ZCRB1_BOVIN Bos taurus ENSBTAG00000019119 I 0.787
LOC100049989 Equus caballus ENSECAG00000012174 I 0.787
ZCRB1 Canis familiaris ENSCAFG00000009788 I 0.787
ZCRB1 Tursiops truncatus ENSTTRG00000001378 I 0.787
Zcrb1 Rattus norvegicus ENSRNOG00000004996 I 0.787
ZCRB1 Meleagris gallopavo ENSMGAG00000009450 I 0.775
ZCRB1 Gallus gallus ENSGALG00000009544 I 0.775
ZCRB1 Loxodonta africana ENSLAFG00000008847 I 0.775
ZCRB1 Anolis carolinensis ENSACAG00000003172 I 0.775
ZCRB1 Taeniopygia guttata ENSTGUG00000005829 I 0.775
ENSMODG00000008893 Monodelphis domestica ENSMODG00000008893 I 0.764
XM_001371517.1 Monodelphis domestica ENSMODG00000006493 I 0.764
ZCRB1 Ornithorhynchus anatinus ENSOANG00000009891 I 0.753
ZCRB1 Sorex araneus ENSSARG00000000492 N 0.750
ZCRB1 Procavia capensis ENSPCAG00000011749 I 0.742