GSVIVG00025580001 (Vitis vinifera)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		GSVIVG00025580001 T07385_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00025580001 RRM 1 34
GSVIVT00025580001 CCHC ZF 62 79
GSVIVT00025580001 CCHC ZF 84 101

Links

Other CCHC ZF,RRM family RBPs
Other Vitis vinifera RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A9PGS4_POPTR Populus trichocarpa POPTR_0006s23170 N 0.886
At-RS2Z Arabidopsis thaliana AT3G53500-TAIR-G N 0.886
LOC_Os01g06290 Oryza sativa LOC_Os01g06290 N 0.871
RS2Z33 Arabidopsis thaliana AT2G37340-TAIR-G N 0.857
chr1.CM0033.10.nd Lotus japonicus chr1.CM0033.10.nd N 0.814
PK05606.1 Cannabis sativa PK05606.1 N 0.803
GRMZM2G083975 Zea mays GRMZM2G083975 N 0.757
mgf016290m Mimulus guttatus mgf016290m N 0.753
ppa009671m Prunus persica ppa009671m N 0.744
GRMZM2G175419 Zea mays GRMZM2G175419 N 0.709