PK05606.1 (Cannabis sativa)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		PK05606.1 T07127_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK05606.1 RRM 1 40
PK05606.1 CCHC ZF 64 81
PK05606.1 CCHC ZF 86 103

Links

Other CCHC ZF,RRM family RBPs
Other Cannabis sativa RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa009671m Prunus persica ppa009671m N 0.866
mgf016290m Mimulus guttatus mgf016290m N 0.827
A9PGS4_POPTR Populus trichocarpa POPTR_0006s23170 N 0.803
GSVIVG00025580001 Vitis vinifera GSVIVG00025580001 N 0.803
RS2Z33 Arabidopsis thaliana AT2G37340-TAIR-G N 0.789
At-RS2Z Arabidopsis thaliana AT3G53500-TAIR-G N 0.789
LOC_Os01g06290 Oryza sativa LOC_Os01g06290 N 0.750
GRMZM2G083975 Zea mays GRMZM2G083975 N 0.724
ppa009294m Prunus persica ppa009294m N 0.717
ppa009074m Prunus persica ppa009074m N 0.707