CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CHGG_00209
(
Chaetomium globosum
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CHGG_00209
T07900_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CHGT_00209
CCHC ZF
386
403
GLCFRCGQHGHISSRCPS
Links
Other
CCHC ZF
family RBPs
Other
Chaetomium globosum
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CHGG_02707
Chaetomium globosum
CHGG_02707
N
1.000
PTTG_10809
Puccinia triticina
PTTG_10809
N
0.722
PTTG_11068
Puccinia triticina
PTTG_11068
N
0.722
PTTG_11278
Puccinia triticina
PTTG_11278
N
0.722
PTTG_11563
Puccinia triticina
PTTG_11563
N
0.722
PTTG_10713
Puccinia triticina
PTTG_10713
N
0.722
PTTG_08665
Puccinia triticina
PTTG_08665
N
0.722
PTTG_01306
Puccinia triticina
PTTG_01306
N
0.722
PTTG_04497
Puccinia triticina
PTTG_04497
N
0.722
PTTG_05648
Puccinia triticina
PTTG_05648
N
0.722
PTTG_08330
Puccinia triticina
PTTG_08330
N
0.722
PTTG_10552
Puccinia triticina
PTTG_10552
N
0.722