CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_10713
(
Puccinia triticina
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTTG_10713
T08484_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_10713T0
CCHC ZF
259
276
GLCFRCGAQGHISRNCPT
Links
Other
CCHC ZF
family RBPs
Other
Puccinia triticina
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTTG_10809
Puccinia triticina
PTTG_10809
N
1.000
PTTG_11278
Puccinia triticina
PTTG_11278
N
1.000
PTTG_10552
Puccinia triticina
PTTG_10552
N
0.944
PTTG_11068
Puccinia triticina
PTTG_11068
N
0.944
PTTG_11563
Puccinia triticina
PTTG_11563
N
0.944
PTTG_01306
Puccinia triticina
PTTG_01306
N
0.889
PTTG_10451
Puccinia triticina
PTTG_10451
N
0.889
PTTG_03874
Puccinia triticina
PTTG_03874
N
0.889
PTTG_08777
Puccinia triticina
PTTG_08777
N
0.889
PTTG_08330
Puccinia triticina
PTTG_08330
N
0.833
PTTG_11462
Puccinia triticina
PTTG_11462
N
0.833
PTTG_04497
Puccinia triticina
PTTG_04497
N
0.778
PGTG_18613
Puccinia graminis
PGTG_18613
N
0.778
PGTG_20442
Puccinia graminis
PGTG_20442
N
0.778
PTTG_09789
Puccinia triticina
PTTG_09789
N
0.778
PTTG_10291
Puccinia triticina
PTTG_10291
N
0.778
PGTG_15116
Puccinia graminis
PGTG_15116
N
0.778
PTTG_08665
Puccinia triticina
PTTG_08665
N
0.778
PTTG_07469
Puccinia triticina
PTTG_07469
N
0.778
PGTG_09834
Puccinia graminis
PGTG_09834
N
0.778
PGTG_05408
Puccinia graminis
PGTG_05408
N
0.778
PGTG_03348
Puccinia graminis
PGTG_03348
N
0.778
PGTG_03172
Puccinia graminis
PGTG_03172
N
0.778
SB08G020705
Sorghum bicolor
Sb08g020705
N
0.722
CHGG_00209
Chaetomium globosum
CHGG_00209
N
0.722
SB06G012571
Sorghum bicolor
Sb06g012571
N
0.722
SB01G031795
Sorghum bicolor
Sb01g031795
N
0.722
PTTG_11057
Puccinia triticina
PTTG_11057
N
0.722
PTTG_11299
Puccinia triticina
PTTG_11299
N
0.722
SB01G029366
Sorghum bicolor
Sb01g029366
N
0.722
CHGG_02707
Chaetomium globosum
CHGG_02707
N
0.722
PTTG_06752
Puccinia triticina
PTTG_06752
N
0.722
PTTG_10751
Puccinia triticina
PTTG_10751
N
0.722
PGTG_12646
Puccinia graminis
PGTG_12646
N
0.722
PGTG_16335
Puccinia graminis
PGTG_16335
N
0.722
PGTG_05406
Puccinia graminis
PGTG_05406
N
0.722
PGTG_12045
Puccinia graminis
PGTG_12045
N
0.722
PGTG_05307
Puccinia graminis
PGTG_05307
N
0.722
PTTG_07033
Puccinia triticina
PTTG_07033
N
0.722