PGTG_05870 (Puccinia graminis)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 PGTG_05870 T08145_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PGTT_05870 CCHC ZF 214 231

Links

Other CCHC ZF family RBPs
Other Puccinia graminis RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os10g07578 Oryza sativa LOC_Os10g07578 N 0.778
LOC_Os12g07910 Oryza sativa LOC_Os12g07910 N 0.722
Aqu1.204126 Amphimedon queenslandica Aqu1.204126 N 0.722
MDP0000314617 Malus x domestica MDP0000314617 N 0.722
LOC_Os11g45610 Oryza sativa LOC_Os11g45610 N 0.722
LOC_Os10g29420 Oryza sativa LOC_Os10g29420 N 0.722
LOC_Os07g05600 Oryza sativa LOC_Os07g05600 N 0.722
LOC_Os10g03110 Oryza sativa LOC_Os10g03110 N 0.722
LOC_Os04g24570 Oryza sativa LOC_Os04g24570 N 0.722
LOC_Os11g06960 Oryza sativa LOC_Os11g06960 N 0.722