CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PK25691.1
(
Cannabis sativa
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PK25691.1
T08802_0.6
Cannabis sativa genome (2012-Feb-20)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK25691.1
CCHC ZF
269
285
KGCYHCGKPGHIRRDCY
Links
Other
CCHC ZF
family RBPs
Other
Cannabis sativa
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PK01187.1
Cannabis sativa
PK01187.1
N
0.765
PK00617.1
Cannabis sativa
PK00617.1
N
0.765
Minc07977
Meloidogyne incognita
Minc07977
N
0.722
PK18721.1
Cannabis sativa
PK18721.1
N
0.706
PK07703.1
Cannabis sativa
PK07703.1
N
0.706
Glyma11g10610.1
Glycine max
Glyma11g10610.1
N
0.706