AIN1 (Arabidopsis thaliana)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 AT1G54490-TAIR-G T09315_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT1G54490.1-P CCHC ZF 263 280

Links

Other CCHC ZF family RBPs
Other Arabidopsis thaliana RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Medtr1g096550 Medicago truncatula Medtr1g096550 N 0.778
30128.m008637 Ricinus communis 30128.m008637 N 0.778
PDK_20s1528451g001 Phoenix dactylifera PDK_20s1528451g001 N 0.722
PDK_20s1898261g001 Phoenix dactylifera PDK_20s1898261g001 N 0.722
chr5.LjT15D05.170.nd Lotus japonicus chr5.LjT15D05.170.nd N 0.722
Glyma19g43160.1 Glycine max Glyma19g43160.1 N 0.722
Cucsa.033870 Cucumis sativus Cucsa.033870 N 0.722
Glyma03g40500.1 Glycine max Glyma03g40500.1 N 0.722