CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CJA10241
(
Caenorhabditis japonica
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CJA10241
T09681_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA10241
CCHC ZF
15
31
GECLYCGIPGHFANECG
Links
Other
CCHC ZF
family RBPs
Other
Caenorhabditis japonica
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CJA15255
Caenorhabditis japonica
CJA15255
N
0.833
CJA28475
Caenorhabditis japonica
CJA28475
N
0.833
CJA17831
Caenorhabditis japonica
CJA17831
N
0.833
CJA09176
Caenorhabditis japonica
CJA09176
N
0.778
CBG24692
Caenorhabditis briggsae
CBG24692
N
0.722
CJA05236
Caenorhabditis japonica
CJA05236
N
0.722