CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CRE02565
(
Caenorhabditis remanei
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CRE02565
T09832_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE02565
CCHC ZF
476
492
QRCFSCGGVGHLARQCP
Links
Other
CCHC ZF
family RBPs
Other
Caenorhabditis remanei
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CRE07474
Caenorhabditis remanei
CRE07474
N
1.000
CRE09693
Caenorhabditis remanei
CRE09693
N
0.941
CRE03622
Caenorhabditis remanei
CRE03622
N
0.941
CRE11513
Caenorhabditis remanei
CRE11513
N
0.889
CRE02519
Caenorhabditis remanei
CRE02519
N
0.889
CRE24570
Caenorhabditis remanei
CRE24570
N
0.882
CRE13664
Caenorhabditis remanei
CRE13664
N
0.882
CRE19006
Caenorhabditis remanei
CRE19006
N
0.882
CRE08346
Caenorhabditis remanei
CRE08346
N
0.882
ENSGACG00000020110
Gasterosteus aculeatus
ENSGACG00000020110
N
0.722
ENSGACG00000013495
Gasterosteus aculeatus
ENSGACG00000013495
N
0.722
ENSGACG00000001944
Gasterosteus aculeatus
ENSGACG00000001944
N
0.722