CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC6
(
Echinops telfairi
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSETEG00000007739
T10164_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000006289
CCHC ZF
1160
1177
RCCRICGKIGHFMKDCPL
ENSETEP00000006289
CCHC ZF
1266
1283
KRCFICGREGHIKKECPQ
Links
Other
CCHC ZF
family RBPs
Other
Echinops telfairi
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZCCHC6
Homo sapiens
ENSG00000083223
N
0.972
ZCCHC6
Callithrix jacchus
ENSCJAG00000001845
N
0.972
ZCCHC6
Procavia capensis
ENSPCAG00000011630
N
0.972
ZCCHC6
Pan troglodytes
ENSPTRG00000021076
N
0.972
ZCCHC6
Macaca mulatta
ENSMMUG00000003401
N
0.972
ZCCHC6
Ochotona princeps
ENSOPRG00000002893
N
0.944
ZCCHC11
Gorilla gorilla
ENSGGOG00000009886
N
0.722
ENSCSAVG00000006670
Ciona savignyi
ENSCSAVG00000006670
N
0.722
ZCCHC6
Dasypus novemcinctus
ENSDNOG00000010663
N
0.722
ZCCHC6
Choloepus hoffmanni
ENSCHOG00000011129
N
0.722
Zcchc11
Rattus norvegicus
ENSRNOG00000009720
N
0.722
ZCCHC6
Loxodonta africana
ENSLAFG00000007884
N
0.722
ZCCHC11
Pteropus vampyrus
ENSPVAG00000009804
N
0.722
ZCCHC6
Otolemur garnettii
ENSOGAG00000015630
N
0.722
SNAPOd2T00006352001
Oikopleura dioica
SNAPOd2T00006352001
N
0.722