ENSCSAVG00000010478 (Ciona savignyi)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSCSAVG00000010478 T10076_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAVP00000017796 CCHC ZF 72 89
ENSCSAVP00000017796 CCHC ZF 99 116
ENSCSAVP00000017796 CCHC ZF 127 144
ENSCSAVP00000017796 CCHC ZF 154 171

Links

Other CCHC ZF family RBPs
Other Ciona savignyi RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCING00000008173 Ciona intestinalis ENSCING00000008173 N 0.875
Ame_R004078 Ailuropoda melanoleuca Ame_R004078 N 0.736
ZCCHC9 Tursiops truncatus ENSTTRG00000013796 N 0.736
XM_854231.1 Canis familiaris ENSCAFG00000008703 N 0.736
ZCCHC9 Loxodonta africana ENSLAFG00000012763 N 0.736
ZCCHC9 Choloepus hoffmanni ENSCHOG00000005268 N 0.736
ZCCHC9 Cavia porcellus ENSCPOG00000003947 N 0.722
ZCCHC9 Sus scrofa ENSSSCG00000014129 N 0.722
ZCCHC9 Vicugna pacos ENSVPAG00000009423 N 0.722
ZCCHC9 Sorex araneus ENSSARG00000008580 N 0.722
LOC100395171 Callithrix jacchus ENSCJAG00000019486 N 0.722
Zcchc9 Rattus norvegicus ENSRNOG00000014927 N 0.722
A6H756_BOVIN Bos taurus ENSBTAG00000005265 N 0.722
XM_847464.1 Canis familiaris ENSCAFG00000023419 N 0.722
ZCCHC9 Pan troglodytes ENSPTRG00000017047 N 0.722
Q3YAK8_MACMU Macaca mulatta ENSMMUG00000020655 N 0.722
ZCCHC9 Dasypus novemcinctus ENSDNOG00000016708 N 0.722
ZCCHC9 Myotis lucifugus ENSMLUG00000001886 N 0.722
ZCCHC9 Homo sapiens ENSG00000131732 N 0.722
ZCCHC9 Erinaceus europaeus ENSEEUG00000010726 N 0.722
ZCCHC9 Oryctolagus cuniculus ENSOCUG00000011215 N 0.722
Zcchc9 Dipodomys ordii ENSDORG00000001300 N 0.722
ZCCHC9 Gorilla gorilla ENSGGOG00000013790 N 0.722
ENSPPYG00000015604 Pongo pygmaeus ENSPPYG00000015604 N 0.722
LOC100073252 Equus caballus ENSECAG00000023186 N 0.708
ZCCHC9 Anolis carolinensis ENSACAG00000010965 N 0.708
ZCCHC9 Otolemur garnettii ENSOGAG00000002543 N 0.708
ZCCHC9 Tarsius syrichta ENSTSYG00000012423 N 0.708
ZCCHC9 Ornithorhynchus anatinus ENSOANG00000014769 N 0.708
ZCCHC9 Microcebus murinus ENSMICG00000016266 N 0.708