Ame_R004078 (Ailuropoda melanoleuca)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Ame_R004078 T15256_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Ame_R004078 CCHC ZF 128 145
Ame_R004078 CCHC ZF 155 172
Ame_R004078 CCHC ZF 184 201
Ame_R004078 CCHC ZF 211 228

Links

Other CCHC ZF family RBPs
Other Ailuropoda melanoleuca RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_854231.1 Canis familiaris ENSCAFG00000008703 N 0.986
ZCCHC9 Choloepus hoffmanni ENSCHOG00000005268 N 0.986
ZCCHC9 Vicugna pacos ENSVPAG00000009423 N 0.972
ZCCHC9 Dasypus novemcinctus ENSDNOG00000016708 N 0.972
ZCCHC9 Ornithorhynchus anatinus ENSOANG00000014769 N 0.958
Zcchc9 Dipodomys ordii ENSDORG00000001300 N 0.958
ZCCHC9 Tursiops truncatus ENSTTRG00000013796 N 0.958
ZCCHC9 Loxodonta africana ENSLAFG00000012763 N 0.958
XM_847464.1 Canis familiaris ENSCAFG00000023419 N 0.958
Q3YAK8_MACMU Macaca mulatta ENSMMUG00000020655 N 0.944
ZCCHC9 Microcebus murinus ENSMICG00000016266 N 0.944
ENSPPYG00000015604 Pongo pygmaeus ENSPPYG00000015604 N 0.944
ZCCHC9 Sus scrofa ENSSSCG00000014129 N 0.944
Zcchc9 Rattus norvegicus ENSRNOG00000014927 N 0.944
ZCCHC9 Pan troglodytes ENSPTRG00000017047 N 0.944
ZCCHC9 Tarsius syrichta ENSTSYG00000012423 N 0.944
ZCCHC9 Gorilla gorilla ENSGGOG00000013790 N 0.944
LOC100073252 Equus caballus ENSECAG00000023186 N 0.944
ZCCHC9 Erinaceus europaeus ENSEEUG00000010726 N 0.944
A6H756_BOVIN Bos taurus ENSBTAG00000005265 N 0.944
ZCCHC9 Homo sapiens ENSG00000131732 N 0.944
ZCCHC9 Otolemur garnettii ENSOGAG00000002543 N 0.931
ZCCHC9 Myotis lucifugus ENSMLUG00000001886 N 0.931
LOC100395171 Callithrix jacchus ENSCJAG00000019486 N 0.931
ZCCHC9 Oryctolagus cuniculus ENSOCUG00000011215 N 0.931
ZCCHC9 Sorex araneus ENSSARG00000008580 N 0.931
Zcchc9 Mus musculus ENSMUSG00000021621 N 0.917
ZCCHC9 Cavia porcellus ENSCPOG00000003947 N 0.903
XM_001363259.1 Monodelphis domestica ENSMODG00000020261 N 0.903
ZCCHC9 Anolis carolinensis ENSACAG00000010965 N 0.889
ZCCHC9 Macropus eugenii ENSMEUG00000011005 N 0.889
ZCCHC9 Oryzias latipes ENSORLG00000020135 N 0.861
ZCCHC9 Tetraodon nigroviridis ENSTNIG00000013571 N 0.847
ZCCHC9 Taeniopygia guttata ENSTGUG00000006994 N 0.833
AAH68817 Xenopus laevis AAH68817 N 0.833
ZCCHC9 Gallus gallus ENSGALG00000015603 N 0.833
ZCCHC9 Takifugu rubripes ENSTRUG00000018600 N 0.819
zcchc9 Xenopus tropicalis ENSXETG00000027804 N 0.819
ZCCHC9 Meleagris gallopavo ENSMGAG00000006841 N 0.819
ZCCHC9 Ochotona princeps ENSOPRG00000004474 N 0.778
zcchc9 Danio rerio ENSDARG00000007531 N 0.750
ZCCHC9 Gasterosteus aculeatus ENSGACG00000015540 N 0.750
ENSCING00000008173 Ciona intestinalis ENSCING00000008173 N 0.736
ENSCSAVG00000010478 Ciona savignyi ENSCSAVG00000010478 N 0.736