Zcchc9 (Rattus norvegicus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSRNOG00000014927 T10453_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000020111 CCHC ZF 128 145
ENSRNOP00000020111 CCHC ZF 155 172
ENSRNOP00000020111 CCHC ZF 184 201
ENSRNOP00000020111 CCHC ZF 211 228
ENSRNOP00000020217 CCHC ZF 106 123
ENSRNOP00000020217 CCHC ZF 135 152

Links

Other CCHC ZF family RBPs
Other Rattus norvegicus RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Zcchc9 Mus musculus ENSMUSG00000021621 N 0.972
ZCCHC9 Sorex araneus ENSSARG00000008580 N 0.958
ZCCHC9 Oryctolagus cuniculus ENSOCUG00000011215 N 0.958
Zcchc9 Dipodomys ordii ENSDORG00000001300 N 0.958
ZCCHC9 Gorilla gorilla ENSGGOG00000013790 N 0.944
Ame_R004078 Ailuropoda melanoleuca Ame_R004078 N 0.944
A6H756_BOVIN Bos taurus ENSBTAG00000005265 N 0.944
ZCCHC9 Homo sapiens ENSG00000131732 N 0.944
XM_854231.1 Canis familiaris ENSCAFG00000008703 N 0.944
ZCCHC9 Microcebus murinus ENSMICG00000016266 N 0.944
ENSPPYG00000015604 Pongo pygmaeus ENSPPYG00000015604 N 0.944
ZCCHC9 Pan troglodytes ENSPTRG00000017047 N 0.944
Q3YAK8_MACMU Macaca mulatta ENSMMUG00000020655 N 0.944
LOC100395171 Callithrix jacchus ENSCJAG00000019486 N 0.931
ZCCHC9 Choloepus hoffmanni ENSCHOG00000005268 N 0.931
ZCCHC9 Otolemur garnettii ENSOGAG00000002543 N 0.931
ZCCHC9 Loxodonta africana ENSLAFG00000012763 N 0.931
XM_001363259.1 Monodelphis domestica ENSMODG00000020261 N 0.917
ZCCHC9 Erinaceus europaeus ENSEEUG00000010726 N 0.917
ZCCHC9 Ornithorhynchus anatinus ENSOANG00000014769 N 0.917
ZCCHC9 Dasypus novemcinctus ENSDNOG00000016708 N 0.917
ZCCHC9 Vicugna pacos ENSVPAG00000009423 N 0.917
ZCCHC9 Sus scrofa ENSSSCG00000014129 N 0.917
ZCCHC9 Tarsius syrichta ENSTSYG00000012423 N 0.917
ZCCHC9 Tursiops truncatus ENSTTRG00000013796 N 0.903
XM_847464.1 Canis familiaris ENSCAFG00000023419 N 0.903
ZCCHC9 Cavia porcellus ENSCPOG00000003947 N 0.903
LOC100073252 Equus caballus ENSECAG00000023186 N 0.889
ZCCHC9 Myotis lucifugus ENSMLUG00000001886 N 0.875
ZCCHC9 Anolis carolinensis ENSACAG00000010965 N 0.875
ZCCHC9 Taeniopygia guttata ENSTGUG00000006994 N 0.861
ZCCHC9 Macropus eugenii ENSMEUG00000011005 N 0.861
ZCCHC9 Oryzias latipes ENSORLG00000020135 N 0.819
ZCCHC9 Gallus gallus ENSGALG00000015603 N 0.806
ZCCHC9 Ochotona princeps ENSOPRG00000004474 N 0.806
ZCCHC9 Tetraodon nigroviridis ENSTNIG00000013571 N 0.792
ZCCHC9 Meleagris gallopavo ENSMGAG00000006841 N 0.792
AAH68817 Xenopus laevis AAH68817 N 0.792
zcchc9 Xenopus tropicalis ENSXETG00000027804 N 0.792
ZCCHC9 Takifugu rubripes ENSTRUG00000018600 N 0.764
ENSCING00000008173 Ciona intestinalis ENSCING00000008173 N 0.736
ZCCHC9 Gasterosteus aculeatus ENSGACG00000015540 N 0.722
ENSCSAVG00000010478 Ciona savignyi ENSCSAVG00000010478 N 0.722
zcchc9 Danio rerio ENSDARG00000007531 N 0.708
Aqu1.218341 Amphimedon queenslandica Aqu1.218341 N 0.708