CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC6
(
Otolemur garnettii
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSOGAG00000015630
T10368_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000014003
CCHC ZF
964
981
VVCSLCKREGHLKKDCPD
ENSOGAP00000014003
CCHC ZF
1452
1469
KRCFICGREGHIKKECPQ
Links
Other
CCHC ZF
family RBPs
Other
Otolemur garnettii
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZCCHC6
Loxodonta africana
ENSLAFG00000007884
N
0.972
ZCCHC6
Dasypus novemcinctus
ENSDNOG00000010663
N
0.972
ZCCHC6
Choloepus hoffmanni
ENSCHOG00000011129
N
0.944
ZCCHC6
Pan troglodytes
ENSPTRG00000021076
N
0.722
ZCCHC6
Myotis lucifugus
ENSMLUG00000001298
N
0.722
ZCCHC6
Macaca mulatta
ENSMMUG00000003401
N
0.722
ZCCHC6
Homo sapiens
ENSG00000083223
N
0.722
ZCCHC6
Equus caballus
ENSECAG00000014831
N
0.722
ZCCHC6
Callithrix jacchus
ENSCJAG00000001845
N
0.722
ZCCHC6
Procavia capensis
ENSPCAG00000011630
N
0.722
ZCCHC6
Anolis carolinensis
ENSACAG00000000279
N
0.722
ZCCHC6
Echinops telfairi
ENSETEG00000007739
N
0.722