LOC_Os06g31830 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os06g31830 T11655_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os06g31830.1 CCHC ZF 496 509

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os09g02990 Oryza sativa LOC_Os09g02990 N 0.929
LOC_Os01g21536 Oryza sativa LOC_Os01g21536 N 0.800
LOC_Os12g43050 Oryza sativa LOC_Os12g43050 N 0.778
LOC_Os12g34650 Oryza sativa LOC_Os12g34650 N 0.778
LOC_Os01g35070 Oryza sativa LOC_Os01g35070 N 0.778
LOC_Os06g35220 Oryza sativa LOC_Os06g35220 N 0.778
LOC_Os02g25180 Oryza sativa LOC_Os02g25180 N 0.778
LOC_Os02g18340 Oryza sativa LOC_Os02g18340 N 0.778
LOC_Os04g03190 Oryza sativa LOC_Os04g03190 N 0.778
LOC_Os12g22380 Oryza sativa LOC_Os12g22380 N 0.778
LOC_Os08g17890 Oryza sativa LOC_Os08g17890 N 0.778
LOC_Os11g15690 Oryza sativa LOC_Os11g15690 N 0.778
LOC_Os05g18480 Oryza sativa LOC_Os05g18480 N 0.733
LOC_Os03g45550 Oryza sativa LOC_Os03g45550 N 0.722
LOC_Os03g39450 Oryza sativa LOC_Os03g39450 N 0.722
LOC_Os07g28200 Oryza sativa LOC_Os07g28200 N 0.722
LOC_Os04g18900 Oryza sativa LOC_Os04g18900 N 0.722
LOC_Os04g29330 Oryza sativa LOC_Os04g29330 N 0.722
LOC_Os04g56890 Oryza sativa LOC_Os04g56890 N 0.722
LOC_Os08g24220 Oryza sativa LOC_Os08g24220 N 0.722
LOC_Os12g19620 Oryza sativa LOC_Os12g19620 N 0.722
LOC_Os11g22540 Oryza sativa LOC_Os11g22540 N 0.722
LOC_Os11g19430 Oryza sativa LOC_Os11g19430 N 0.722
LOC_Os11g14650 Oryza sativa LOC_Os11g14650 N 0.722
LOC_Os09g03440 Oryza sativa LOC_Os09g03440 N 0.722
LOC_Os11g14610 Oryza sativa LOC_Os11g14610 N 0.722
LOC_Os11g21870 Oryza sativa LOC_Os11g21870 N 0.722