LOC_Os09g02990 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os09g02990 T12070_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os09g02990.1 CCHC ZF 596 609

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os06g31830 Oryza sativa LOC_Os06g31830 N 0.929
LOC_Os01g21536 Oryza sativa LOC_Os01g21536 N 0.733
LOC_Os04g03190 Oryza sativa LOC_Os04g03190 N 0.722
LOC_Os06g35220 Oryza sativa LOC_Os06g35220 N 0.722
LOC_Os08g17890 Oryza sativa LOC_Os08g17890 N 0.722
LOC_Os02g25180 Oryza sativa LOC_Os02g25180 N 0.722
LOC_Os01g35070 Oryza sativa LOC_Os01g35070 N 0.722
LOC_Os12g22380 Oryza sativa LOC_Os12g22380 N 0.722
LOC_Os12g34650 Oryza sativa LOC_Os12g34650 N 0.722
LOC_Os12g43050 Oryza sativa LOC_Os12g43050 N 0.722
LOC_Os11g15690 Oryza sativa LOC_Os11g15690 N 0.722
LOC_Os02g18340 Oryza sativa LOC_Os02g18340 N 0.722