LOC_Os08g29980 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os08g29980 T12020_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os08g29980.1 CCHC ZF 304 321

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os11g11860 Oryza sativa LOC_Os11g11860 N 0.889
LOC_Os11g45610 Oryza sativa LOC_Os11g45610 N 0.833
LOC_Os07g05600 Oryza sativa LOC_Os07g05600 N 0.833
LOC_Os04g24570 Oryza sativa LOC_Os04g24570 N 0.833
LOC_Os05g48170 Oryza sativa LOC_Os05g48170 N 0.833
LOC_Os03g30810 Oryza sativa LOC_Os03g30810 N 0.833
LOC_Os05g03600 Oryza sativa LOC_Os05g03600 N 0.833
LOC_Os12g07910 Oryza sativa LOC_Os12g07910 N 0.833
LOC_Os08g28530 Oryza sativa LOC_Os08g28530 N 0.833
LOC_Os09g16100 Oryza sativa LOC_Os09g16100 N 0.833
LOC_Os10g29420 Oryza sativa LOC_Os10g29420 N 0.833
LOC_Os04g22050 Oryza sativa LOC_Os04g22050 N 0.778
LOC_Os11g06960 Oryza sativa LOC_Os11g06960 N 0.778
BRADI2G01640 Brachypodium distachyon BRADI2G01640 N 0.778
LOC_Os10g07578 Oryza sativa LOC_Os10g07578 N 0.778
LOC_Os06g42080 Oryza sativa LOC_Os06g42080 N 0.778
LOC_Os06g28330 Oryza sativa LOC_Os06g28330 N 0.722
LOC_Os04g35870 Oryza sativa LOC_Os04g35870 N 0.722
LOC_Os07g18730 Oryza sativa LOC_Os07g18730 N 0.722
LOC_Os04g41520 Oryza sativa LOC_Os04g41520 N 0.722
LOC_Os04g49290 Oryza sativa LOC_Os04g49290 N 0.722
LOC_Os08g15010 Oryza sativa LOC_Os08g15010 N 0.722
LOC_Os06g06802 Oryza sativa LOC_Os06g06802 N 0.722
LOC_Os06g05680 Oryza sativa LOC_Os06g05680 N 0.722
LOC_Os02g06810 Oryza sativa LOC_Os02g06810 N 0.722
LOC_Os11g44190 Oryza sativa LOC_Os11g44190 N 0.722
LOC_Os12g09260 Oryza sativa LOC_Os12g09260 N 0.722
LOC_Os10g41610 Oryza sativa LOC_Os10g41610 N 0.722
LOC_Os10g03110 Oryza sativa LOC_Os10g03110 N 0.722
LOC_Os09g29810 Oryza sativa LOC_Os09g29810 N 0.722
LOC_Os12g24290 Oryza sativa LOC_Os12g24290 N 0.722
LOC_Os12g40060 Oryza sativa LOC_Os12g40060 N 0.722
LOC_Os02g17720 Oryza sativa LOC_Os02g17720 N 0.722
LOC_Os02g20200 Oryza sativa LOC_Os02g20200 N 0.722
LOC_Os09g14500 Oryza sativa LOC_Os09g14500 N 0.722
LOC_Os01g50090 Oryza sativa LOC_Os01g50090 N 0.722
LOC_Os01g16850 Oryza sativa LOC_Os01g16850 N 0.722
LOC_Os04g13350 Oryza sativa LOC_Os04g13350 N 0.722