estExtDG_Genemark1.C_1080017 (Emiliania huxleyi)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 estExtDG_Genemark1.C_1080017 T13584_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExtDG_Genemark1.C_1080017 CCHC ZF 75 91

Links

Other CCHC ZF family RBPs
Other Emiliania huxleyi RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pg.C_130086 Sporobolomyces roseus estExt_fgenesh1_pg.C_130086 N 0.765
EDP43343.1 Malassezia globosa EDP43343.1 N 0.722
estExt_Genewise1Plus.C_70072 Volvox carteri estExt_Genewise1Plus.C_70072 N 0.722
SPBP8B7.15c Schizosaccharomyces pombe SPBP8B7.15c N 0.706
EIN_288500 Entamoeba invadens EIN_288500 N 0.706
e_gw1.0.2594.1 Selaginella moellendorfii e_gw1.0.2594.1 N 0.706
SPPG_06553 Spizellomyces punctatus SPPG_06553 N 0.706
e_gw1.147.34.1 Physcomitrella patens e_gw1.147.34.1 N 0.706
e_gwh2.3.362.1 Phanerochaete chrysosporium e_gwh2.3.362.1 N 0.706
e_gw1.84.86.1 Physcomitrella patens e_gw1.84.86.1 N 0.706
e_gw1.311.2.1 Postia placenta e_gw1.311.2.1 N 0.706
CPSG_03009 Coccidioides posadasii CPSG_03009 N 0.706
e_gw1.135.14.1 Postia placenta e_gw1.135.14.1 N 0.706
CC1G_00892 Coprinopsis cinerea CC1G_00892 N 0.706
estExt_Genewise1.C_60832 Pleurotus ostreatus estExt_Genewise1.C_60832 N 0.706
estExt_fgenesh2_pm.C_60269 Heterobasidion annosum estExt_fgenesh2_pm.C_60269 N 0.706
eu2.Lbscf0002g03430 Laccaria bicolor eu2.Lbscf0002g03430 N 0.706
estExt_fgenesh1_pm.C_120018 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_120018 N 0.706
fgeneshTM_pm.1_#_792 Tremella mesenterica fgeneshTM_pm.1_#_792 N 0.706
Genemark.8861_g Serpula lacrymans Genemark.8861_g N 0.706
CIMG_04249 Coccidioides immitis CIMG_04249 N 0.706
AMAG_12234 Allomyces macrogynus AMAG_12234 N 0.706
AMAG_05802 Allomyces macrogynus AMAG_05802 N 0.706
CNBG_0786 Cryptococcus neoformans CNBG_0786 N 0.706