fgenesh1_pg.C_scaffold_40000019 (Cochliobolus heterostrophus C5)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh1_pg.C_scaffold_40000019 T13951_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_40000019 CCHC ZF 27 44

Links

Other CCHC ZF family RBPs
Other Cochliobolus heterostrophus C5 RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_1000282 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_1000282 N 1.000
fgenesh1_pg.C_scaffold_59000001 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_59000001 N 0.944
fgenesh1_pg.C_scaffold_24000131 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_24000131 N 0.778
fgenesh1_pg.C_scaffold_26000001 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_26000001 N 0.778
fgenesh1_pg.C_scaffold_175000012 Daphnia pulex fgenesh1_pg.C_scaffold_175000012 N 0.722
TGME49_121560 Toxoplasma gondii TGME49_121560 N 0.722
e_gw1.2.2556.1 Agaricus bisporus e_gw1.2.2556.1 N 0.722
TGGT1_064600 Toxoplasma gondii TGGT1_064600 N 0.722