CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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fgenesh3_pg.7__35
(
Postia placenta
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
fgenesh3_pg.7__35
T14340_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh3_pg.7__35
CCHC ZF
309
326
GLCFYCGQGKHLARDCPN
Links
Other
CCHC ZF
family RBPs
Other
Postia placenta
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExtDG_fgeneshEH_pg.C_710018
Emiliania huxleyi
estExtDG_fgeneshEH_pg.C_710018
N
0.722
estExtDG_fgeneshEH_pg.C_1020080
Emiliania huxleyi
estExtDG_fgeneshEH_pg.C_1020080
N
0.722
PTTG_08342
Puccinia triticina
PTTG_08342
N
0.722
PTTG_06629
Puccinia triticina
PTTG_06629
N
0.722
PTTG_06000
Puccinia triticina
PTTG_06000
N
0.722