Glyma13g15790.1 (Glycine max)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Glyma13g15790.1 T14521_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma13g15790.1 CCHC ZF 161 178
Glyma13g15790.1 CCHC ZF 183 200
Glyma13g15790.1 CCHC ZF 202 219
Glyma13g15790.1 CCHC ZF 229 246
Glyma13g15790.1 CCHC ZF 256 267
Glyma13g15790.1 CCHC ZF 280 292
Glyma13g15790.1 CCHC ZF 309 326

Links

Other CCHC ZF family RBPs
Other Glycine max RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma20g11270.1 Glycine max Glyma20g11270.1 N 0.939
ppa016997m Prunus persica ppa016997m N 0.783
Cucsa.111740 Cucumis sativus Cucsa.111740 N 0.739
MDP0000322170 Malus x domestica MDP0000322170 N 0.739
GRMZM2G033022 Zea mays GRMZM2G033022 N 0.704