Glyma20g11270.1 (Glycine max)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Glyma20g11270.1 T14546_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma20g11270.1 CCHC ZF 165 182
Glyma20g11270.1 CCHC ZF 187 204
Glyma20g11270.1 CCHC ZF 206 223
Glyma20g11270.1 CCHC ZF 233 250
Glyma20g11270.1 CCHC ZF 260 271
Glyma20g11270.1 CCHC ZF 284 296
Glyma20g11270.1 CCHC ZF 313 330

Links

Other CCHC ZF family RBPs
Other Glycine max RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma13g15790.1 Glycine max Glyma13g15790.1 N 0.939
ppa016997m Prunus persica ppa016997m N 0.783
Cucsa.111740 Cucumis sativus Cucsa.111740 N 0.730
MDP0000322170 Malus x domestica MDP0000322170 N 0.730
GRMZM2G033022 Zea mays GRMZM2G033022 N 0.704
mgf008905m Mimulus guttatus mgf008905m N 0.704