MDP0000322170 (Malus x domestica)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 MDP0000322170 T16053_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000322170 CCHC ZF 173 190
MDP0000322170 CCHC ZF 195 212
MDP0000322170 CCHC ZF 214 231
MDP0000322170 CCHC ZF 241 251
MDP0000322170 CCHC ZF 268 279
MDP0000322170 CCHC ZF 292 304
MDP0000322170 CCHC ZF 322 339

Links

Other CCHC ZF family RBPs
Other Malus x domestica RBPs

4 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa016997m Prunus persica ppa016997m N 0.809
Glyma13g15790.1 Glycine max Glyma13g15790.1 N 0.739
Glyma20g11270.1 Glycine max Glyma20g11270.1 N 0.730
B9HQG5_POPTR Populus trichocarpa POPTR_0009s15750 N 0.730