s_451916 (Phytophthora sojae)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 s_451916 T14796_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
s_451916 CCHC ZF 741 758

Links

Other CCHC ZF family RBPs
Other Phytophthora sojae RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT3G61330 Arabidopsis thaliana AT3G61330-TAIR-G N 0.833
AT5G13205 Arabidopsis thaliana AT5G13205-TAIR-G N 0.833
fgenesh1_pg.C_scaffold_1378000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_1378000001 N 0.833
fgenesh1_pg.C_scaffold_1682000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_1682000001 N 0.833
AT3G59720 Arabidopsis thaliana AT3G59720-TAIR-G N 0.833
AT1G58140 Arabidopsis thaliana AT1G58140-TAIR-G N 0.833
AT1G11265 Arabidopsis thaliana AT1G11265-TAIR-G N 0.833
AT1G48710 Arabidopsis thaliana AT1G48710-TAIR-G N 0.833
s_475569 Phytophthora sojae s_475569 N 0.833
SNAP_00026457 Daphnia pulex SNAP_00026457 N 0.722