mgf008200m (Mimulus guttatus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 mgf008200m T14638_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf008200m CCHC ZF 785 802

Links

Other CCHC ZF family RBPs
Other Mimulus guttatus RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSVIVG00031360001 Vitis vinifera GSVIVG00031360001 N 0.889
B9N3Y9_POPTR Populus trichocarpa POPTR_0005s00200 N 0.889
B9N3Z3_POPTR Populus trichocarpa POPTR_0005s00240 N 0.889
Glyma19g41150.1 Glycine max Glyma19g41150.1 N 0.833
BRADI1G03180 Brachypodium distachyon BRADI1G03180 N 0.833
BGIOSIBCE013536 Oryza indica BGIOSIBCE013536 N 0.833
LOC_Os03g61220 Oryza sativa LOC_Os03g61220 N 0.833
cassava12877.valid.m1 Manihot esculenta cassava12877.valid.m1 N 0.833
Sb01g002660 Sorghum bicolor Sb01g002660 N 0.833
LjB06P23.40.nc Lotus japonicus LjB06P23.40.nc N 0.833
30128.m009003 Ricinus communis 30128.m009003 N 0.833
ppa001778m Prunus persica ppa001778m N 0.833
GRMZM2G415491 Zea mays GRMZM2G415491 N 0.833
mgf012653m Mimulus guttatus mgf012653m N 0.778
Medtr1g103590 Medicago truncatula Medtr1g103590 N 0.778
Cucsa.051030 Cucumis sativus Cucsa.051030 N 0.778
Glyma03g38550.1 Glycine max Glyma03g38550.1 N 0.778
PK16552.1 Cannabis sativa PK16552.1 N 0.778
GRMZM2G163072 Zea mays GRMZM2G163072 N 0.778
Medtr7g134530 Medicago truncatula Medtr7g134530 N 0.778
Sjc_0049130 Schistosoma japonicum Sjc_0049130 N 0.722
Sjc_0110320 Schistosoma japonicum Sjc_0110320 N 0.722
Sjc_0073190 Schistosoma japonicum Sjc_0073190 N 0.722
Sjc_0072920 Schistosoma japonicum Sjc_0072920 N 0.722
Sjc_0069260 Schistosoma japonicum Sjc_0069260 N 0.722
Sjc_0041920 Schistosoma japonicum Sjc_0041920 N 0.722