CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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14548_YKL059C
(
Saccharomyces bayanus
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
14548_YKL059C
T15173_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
14548_YKL059C
CCHC ZF
182
197
CYRCGGRDHWIKNCPT
Links
Other
CCHC ZF
family RBPs
Other
Saccharomyces bayanus
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SAKL0D13882g
Lachancea kluyveri
SAKL0D13882g
N
1.000
MPE1
Saccharomyces cerevisiae
YKL059C
N
1.000
13452_YKL059C
Saccharomyces mikatae
13452_YKL059C
N
1.000
13703_YKL059C
Saccharomyces paradoxus
13703_YKL059C
N
1.000
A7TMD2_VANPO
Vanderwaltozyma polyspora
A7TMD2_VANPO
N
0.938
Kwal_8261
Kluyveromyces waltii
Kwal_8261
N
0.938
ZYRO0E06600g
Zygosaccharomyces rouxii
ZYRO0E06600g
N
0.938
ABR070C
Ashbya gossypii
ABR070C
N
0.938
KLLA0C12837g
Kluyveromyces lactis
KLLA0C12837g
N
0.938
KLTH0D08316g
Kluyveromyces thermotolerans
KLTH0D08316g
N
0.938
DEHA0G03058g
Debaryomyces hansenii
DEHA0G03058g
N
0.875
Scas_Contig641.28
Saccharomyces castellii
Scas_Contig641.28
N
0.875
LELG_04332
Lodderomyces elongisporus
LELG_04332
N
0.824
fgenesh1_pg.C_chr_1.1000545
Pichia stipitis
fgenesh1_pg.C_chr_1.1000545
N
0.824
CAGL0I05456g
Candida glabrata
CAGL0I05456g
N
0.812
fgeneshTM_pm.1_#_792
Tremella mesenterica
fgeneshTM_pm.1_#_792
N
0.706
gw1.4.1338.1
Schizophyllum commune
gw1.4.1338.1
N
0.706